add cellprofiler cproj and deepimagej macro

Author: carlosuc3m

pipeline/CellprofilerDeepImageJ.cpproj

@@ -0,0 +1,7 @@
+#@String Directory
+model_path = "C:\\Users\\user\\path\\to\\your\\fiji\\Fiji.app\\models\\stardist" (change this line it by the path to your own model)
+input_image_path = Directory + "\\input.tiff"
+output_folder_path = Directory
+macro_arg = "model_path=[" + model_path + "] input_path=[" + input_image_path +"] output_folder=[" + output_folder_path + "] display_output=null"
+run("DeepImageJ Run", macro_arg)
+File.rename(output_folder_path + File.separator + "input_mask.tif", Directory +  File.separator + "output.tiff")