chore(render): regenerate README and API

Author: Nigel Stuke

README.md

@@ -282,7 +282,7 @@ Also check out the sister project, [awesome-dynamic-analysis](https://github.com
 
 - [Gendarme](https://www.mono-project.com/docs/tools+libraries/tools/gendarme) — Gendarme inspects programs and libraries that contain code in ECMA CIL format (Mono and .NET).
 
-- **Infer#** :warning: — InferSharp (also referred to as Infer#) is an interprocedural and  scalable static code analyzer for C#. Via the capabilities of Facebook's Infer,  this tool detects null pointer dereferences and resource leaks.
+- [Infer#](https://github.com/microsoft/infersharp) — InferSharp (also referred to as Infer#) is an interprocedural and  scalable static code analyzer for C#. Via the capabilities of Facebook's Infer,  this tool detects null pointer dereferences and resource leaks.
 
 - [Meziantou.Analyzer](https://github.com/meziantou/Meziantou.Analyzer) — A Roslyn analyzer to enforce some good practices in C# in terms of design, usage, security, performance, and style.
 
@@ -1016,7 +1016,7 @@ It uses the pycodestyle utility to determine what parts of the code needs to be
 
 - [pylyzers](https://mtshiba.github.io/pylyzer/) — A static code analyzer / language server for Python, written in Rust, focused on type checking and readable output.
 
-- [pyre-check](https://pyre-check.org) — A fast, scalable type checker for large Python codebases.
+- [pyrefly](https://pyrefly.org/) — A fast, incremental type checker and language server for Python, providing IDE features like code navigation, semantic highlighting, and code completion.
 
 - [pyright](https://github.com/Microsoft/pyright) — Static type checker for Python, created to address gaps in existing tools like mypy.
 
@@ -1060,7 +1060,7 @@ YAPF follows a distinctive methodology, originating from the 'clang-format' tool
 <h2>R</h2>
 
 
-- [CodeDepends](https://github.com/duncantl/CodeDepends) — Static Code Analysis for R.
+- **CodeDepends** :warning: — Static Code Analysis for R.
 
 - [cyclocomp](https://github.com/MangoTheCat/cyclocomp) — Quantifies the cyclomatic complexity of R functions / expressions.
 
@@ -1561,7 +1561,7 @@ It supports multiple languages and is designed to be extensible, allowing you to
 
 - [parasoft](https://www.parasoft.com/) :copyright: — Automated Software Testing Solutions for unit-, API-, and web UI testing. Complies with MISRA, OWASP, and others.
 
-- [pfff](https://github.com/facebookarchive/pfff/wiki/Main) — Facebook's tools for code analysis, visualizations, or style-preserving source transformation for many languages.
+- **pfff** :warning: — Facebook's tools for code analysis, visualizations, or style-preserving source transformation for many languages.
 
 - [Pixee](https://pixee.ai) :copyright: — Pixeebot finds security and code quality issues in your code and creates merge-ready pull requests with recommended fixes.
 
@@ -1647,7 +1647,7 @@ It supports multiple languages and is designed to be extensible, allowing you to
 
 - [Teamscale](https://www.cqse.eu/en/teamscale/overview/) :copyright: — Static and dynamic analysis tool supporting more than 25 languages and direct IDE integration. Free hosting for Open Source projects available on request. Free academic licenses available.
 
-- [TencentCodeAnalysis](https://tca.tencent.com/) — Tencent Cloud Code Analysis (TCA for short, code-named CodeDog inside the company early) is a comprehensive platform for code analysis and issue tracking. TCA consist of three components, server, web and client. It integrates of a number of self-developed tools, and also supports dynamic integration of code analysis tools in various programming languages.
+- **TencentCodeAnalysis** :warning: — Tencent Cloud Code Analysis (TCA for short, code-named CodeDog inside the company early) is a comprehensive platform for code analysis and issue tracking. TCA consist of three components, server, web and client. It integrates of a number of self-developed tools, and also supports dynamic integration of code analysis tools in various programming languages.
 
 - [ThreatMapper](https://github.com/deepfence/ThreatMapper) — Vulnerability Scanner and Risk Evaluation for containers, serverless and hosts at runtime. ThreatMapper generates runtime BOMs from dependencies and operating system packages, matches against multiple threat feeds, scans for unprotected secrets, and scores issues based on severity and risk-of-exploit.
 
@@ -1741,7 +1741,7 @@ Loading address: binbloom can parse a raw binary firmware and determine its load
 
 - [Ghidra](https://ghidra-sre.org) — A software reverse engineering (SRE) suite of tools developed by NSA's Research Directorate in support of the Cybersecurity mission
 
-- [Hopper](https://www.hopperapp.com/) :copyright: — macOS and Linux reverse engineering tool that lets you disassemble, decompile and debug applications. Hopper displays the code using different representations, e.g. the Control Flow Graph, and the pseudo-code of a procedure. Supports Apple Silicon.
+- **Hopper** :warning: :copyright: — macOS and Linux reverse engineering tool that lets you disassemble, decompile and debug applications. Hopper displays the code using different representations, e.g. the Control Flow Graph, and the pseudo-code of a procedure. Supports Apple Silicon.
 
 - [IDA Free](https://www.hex-rays.com/products/ida/support/download_freeware) :copyright: — Binary code analysis tool.
 

data/api/tools.json

@@ -3498,7 +3498,7 @@
     "plans": null,
     "description": "Static Code Analysis for R.",
     "discussion": null,
-    "deprecated": null,
+    "deprecated": true,
     "resources": null,
     "reviews": null,
     "demos": null,
@@ -12166,7 +12166,7 @@
     "plans": null,
     "description": "Format markdown code blocks using your favorite code formatters.",
     "discussion": null,
-    "deprecated": null,
+    "deprecated": false,
     "resources": null,
     "reviews": null,
     "demos": null,
@@ -13841,7 +13841,7 @@
     "plans": null,
     "description": "Facebook's tools for code analysis, visualizations, or style-preserving source transformation for many languages.",
     "discussion": null,
-    "deprecated": null,
+    "deprecated": true,
     "resources": null,
     "reviews": null,
     "demos": null,
@@ -15997,8 +15997,8 @@
     "demos": null,
     "wrapper": null
   },
-  "pyre-check": {
-    "name": "pyre-check",
+  "pyrefly": {
+    "name": "pyrefly",
     "categories": [
       "linter"
     ],
@@ -16012,11 +16012,11 @@
     "types": [
       "cli"
     ],
-    "homepage": "https://pyre-check.org",
-    "source": "https://github.com/facebook/pyre-check",
+    "homepage": "https://pyrefly.org/",
+    "source": "https://github.com/facebook/pyrefly",
     "pricing": null,
     "plans": null,
-    "description": "A fast, scalable type checker for large Python codebases.",
+    "description": "A fast, incremental type checker and language server for Python, providing IDE features like code navigation, semantic highlighting, and code completion.",
     "discussion": null,
     "deprecated": null,
     "resources": null,
@@ -20494,7 +20494,7 @@
     "plans": null,
     "description": "Tencent Cloud Code Analysis (TCA for short, code-named CodeDog inside the company early) is a comprehensive platform for code analysis and issue tracking. TCA consist of three components, server, web and client. It integrates of a number of self-developed tools, and also supports dynamic integration of code analysis tools in various programming languages.",
     "discussion": null,
-    "deprecated": null,
+    "deprecated": true,
     "resources": null,
     "reviews": null,
     "demos": null,