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Merge pull request #248 from aodn/feature/nesp-configurations
Feature/nesp configurations
2 parents 686fe73 + 700d3df commit 22ef6ed

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‎aodn_cloud_optimised/bin/aggregated_kelp_nonqc.py‎

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generic_launcher.py

‎aodn_cloud_optimised/bin/aggregated_seabird_nonqc.py‎

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generic_launcher.py

‎aodn_cloud_optimised/bin/aggregated_seagrass_nonqc.py‎

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generic_launcher.py

‎aodn_cloud_optimised/config/dataset/aggregated_kelp_nonqc.json‎

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{
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"dataset_name": "aggregated_kelp_nonqc",
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"logger_name": "aggregated_kelp_nonqc",
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"cloud_optimised_format": "parquet",
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"run_settings": {
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"paths": [
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{
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"type": "parquet",
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"partitioning": null,
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"s3_uri": "s3://aodn-processing/stored/datauplift/kelp/kelp.parquet"
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}
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],
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"cluster": {
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"mode": "local",
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"restart_every_path": false
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},
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"clear_existing_data": true,
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"raise_error": false,
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"batch_size": 4,
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"force_previous_parquet_deletion": false
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},
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"metadata_uuid": null,
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"schema": {
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"occurrenceID": {
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"type": "string",
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"nullable": "False"
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},
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"eventDate": {
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"type": "timestamp[ms]",
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"nullable": "False"
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},
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"decimalLatitude": {
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"type": "double",
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"nullable": "False"
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},
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"decimalLongitude": {
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"type": "double",
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"nullable": "False"
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},
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"label.id": {
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"type": "int64",
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"nullable": "True"
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},
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"verbatimIdentification": {
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"type": "string",
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"nullable": "False"
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},
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"occurrenceStatus": {
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"type": "string",
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"nullable": "False"
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},
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"basisOfRecord": {
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"type": "string",
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"nullable": "False"
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"associatedMedia": {
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"type": "string",
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"nullable": "False"
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"nullable": "False"
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},
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"kingdom": {
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"type": "string",
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"nullable": "False"
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},
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"phylum": {
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"type": "string",
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"nullable": "False"
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},
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"class": {
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"nullable": "True"
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"type": "string",
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"nullable": "True"
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"type": "string",
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"nullable": "True"
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"genus": {
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"type": "string",
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"nullable": "True"
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"type": "string",
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"nullable": "False"
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"aws_opendata_registry": {
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"Name": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Description": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Documentation": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Contact": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"ManagedBy": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"UpdateFrequency": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Tags": [
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"FILL UP MANUALLY - CHECK DOCUMENTATION"
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],
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"License": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Description": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"ARN": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Region": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Type": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Explore": [
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"DataAtWork": {
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"Tutorials": [
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{
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"Title": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"Title": "FILL UP MANUALLY - CHECK DOCUMENTATION",
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"schema_transformation": {
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"add_variables": {
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"filename": {
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"source": "@filename",
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"schema": {
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"units": "1",
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"long_name": "Filename of the source file"
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}
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},
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"timestamp": {
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"source": "@partitioning:time_extent",
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"schema": {
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"type": "int64",
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"units": "1",
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"long_name": "Partition timestamp"
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}
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},
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"polygon": {
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"source": "@partitioning:spatial_extent",
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"schema": {
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"type": "string",
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"units": "1",
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"long_name": "Spatial partition polygon"
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}
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}
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},
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"partitioning": [
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{
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"source_variable": "timestamp",
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"type": "time_extent",
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"time_extent": {
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"time_varname": "eventDate",
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"partition_period": "Y"
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}
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},
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{
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"source_variable": "polygon",
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"type": "spatial_extent",
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"spatial_extent": {
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"lat_varname": "decimalLatitude",
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"lon_varname": "decimalLongitude",
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"spatial_resolution": 90
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}
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}
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],
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"global_attributes": {
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"set": {
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"title": "IMOS - Aggregated Kelp Data Product"
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}
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}
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}
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}

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