|
79 | 79 | - name: Update galaxy packages to match tested Galaxy version |
80 | 80 | run: | |
81 | 81 | base="git+https://github.com/${{ env.GALAXY_FORK }}/galaxy.git@${{ env.GALAXY_BRANCH }}#subdirectory=packages" |
82 | | - pip install --reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
| 82 | + pip install --force-reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
83 | 83 | - name: Install flake8 |
84 | 84 | run: pip install flake8 flake8-import-order |
85 | 85 | - uses: actions/checkout@v5 |
@@ -131,7 +131,7 @@ jobs: |
131 | 131 | - name: Update galaxy packages to match tested Galaxy version |
132 | 132 | run: | |
133 | 133 | base="git+https://github.com/${{ env.GALAXY_FORK }}/galaxy.git@${{ env.GALAXY_BRANCH }}#subdirectory=packages" |
134 | | - pip install --reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
| 134 | + pip install --force-reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
135 | 135 | - name: Set skip version check for push event (i.e. merge to main) |
136 | 136 | if: ${{ github.event_name != 'pull_request' }} |
137 | 137 | run: |
@@ -292,7 +292,7 @@ jobs: |
292 | 292 | - name: Update galaxy packages to match tested Galaxy version |
293 | 293 | run: | |
294 | 294 | base="git+https://github.com/${{ env.GALAXY_FORK }}/galaxy.git@${{ env.GALAXY_BRANCH }}#subdirectory=packages" |
295 | | - pip install --reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
| 295 | + pip install --force-reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
296 | 296 | - name: Cache .planemo |
297 | 297 | uses: actions/cache@v4 |
298 | 298 | id: cache-planemo |
@@ -351,7 +351,7 @@ jobs: |
351 | 351 | - name: Update galaxy packages to match tested Galaxy version |
352 | 352 | run: | |
353 | 353 | base="git+https://github.com/${{ env.GALAXY_FORK }}/galaxy.git@${{ env.GALAXY_BRANCH }}#subdirectory=packages" |
354 | | - pip install --reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
| 354 | + pip install --force-reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
355 | 355 | - name: Combine outputs |
356 | 356 | uses: galaxyproject/planemo-ci-action@v1 |
357 | 357 | id: combine |
@@ -402,7 +402,7 @@ jobs: |
402 | 402 | - name: Update galaxy packages to match tested Galaxy version |
403 | 403 | run: | |
404 | 404 | base="git+https://github.com/${{ env.GALAXY_FORK }}/galaxy.git@${{ env.GALAXY_BRANCH }}#subdirectory=packages" |
405 | | - pip install --reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
| 405 | + pip install --force-reinstall "$base/util" "$base/tool_util_models" "$base/tool_util" |
406 | 406 | - name: Deploy on testtoolshed |
407 | 407 | uses: galaxyproject/planemo-ci-action@v1 |
408 | 408 | with: |
|
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