no idea what this is

Author: eeholmes

.git_diff_name-only

@@ -0,0 +1 @@
+.git_ls-tree_r_name-only_HEAD

.git_ls-tree_r_name-only_HEAD

@@ -1,4 +1,6 @@
 .Rbuildignore
+.git_diff_name-only
+.git_ls-tree_r_name-only_HEAD
 .gitattributes
 .github/.gitignore
 .github/ISSUE_TEMPLATE/bug_report.md
@@ -8,7 +10,7 @@
 .github/workflows/pkgdown.yaml
 .gitignore
 DESCRIPTION
-LICENSE
+LICENSE.md
 NAMESPACE
 NEWS.md
 R/CSEGriskfigure.R
@@ -137,9 +139,15 @@ inst/doc/Chapter_UnivariateDLM.R
 inst/doc/Chapter_inits.R
 inst/doc/EMDerivation.Rnw
 inst/doc/EMDerivation.pdf
+inst/doc/Learning_MARSS.Rmd
+inst/doc/Learning_MARSS.html
 inst/doc/Quick_Examples.R
+inst/doc/Quick_Start.R
+inst/doc/Quick_Start.Rmd
+inst/doc/Quick_Start.html
 inst/doc/Residuals.Rnw
 inst/doc/Residuals.pdf
+inst/doc/UserGuide.Rnw
 inst/doc/UserGuide.pdf
 inst/oldtex/MARSS_out.Rd
 inst/oldtex/Residuals-PDF.Rmd
@@ -1549,34 +1557,12 @@ tests/testthat/test-print.R
 tests/testthat/test-residualsHarvey.R
 tests/testthat/test-structTS.R
 tests/testthat/test-tt.R
-vignettes/EMDerivation-concordance.tex
 vignettes/EMDerivation.Rnw
-vignettes/EMDerivation.aux
-vignettes/EMDerivation.bbl
 vignettes/EMDerivation.bib
-vignettes/EMDerivation.blg
-vignettes/EMDerivation.log
-vignettes/EMDerivation.pdf
-vignettes/EMDerivation.tex
 vignettes/Learning_MARSS.Rmd
-vignettes/Learning_MARSS.html
-vignettes/Quick_Start.R
 vignettes/Quick_Start.Rmd
-vignettes/Quick_Start.html
-vignettes/Residuals-concordance.tex
 vignettes/Residuals.Rnw
-vignettes/Residuals.aux
-vignettes/Residuals.bbl
-vignettes/Residuals.blg
-vignettes/Residuals.log
-vignettes/Residuals.pdf
-vignettes/Residuals.tex
 vignettes/UserGuide.Rnw
-vignettes/UserGuide.aux
-vignettes/UserGuide.log
-vignettes/UserGuide.out
-vignettes/UserGuide.pdf
-vignettes/UserGuide.tex
 vignettes/atsa-labs-cover.jpg
 vignettes/index.html
 vignettes/mathdefs.tex