diff --git a/03_functional/GSVA.qmd b/03_functional/GSVA.qmd index 277198d..b0f9885 100644 --- a/03_functional/GSVA.qmd +++ b/03_functional/GSVA.qmd @@ -124,7 +124,7 @@ coldata[[contrasts[[1]][1]]] <- relevel(as.factor(coldata[[contrasts[[1]][1]]]), coldata$sample <- row.names(coldata) counts <- load_counts(counts_fn) -counts <- counts[, colnames(counts) %in% coldata$sample] +counts <- counts[, coldata$sample] ``` # Method