@@ -404,12 +404,10 @@ In the following example, two separated processings (`conversion` and `smoothing
404404└─ dataset
405405 ├─ sub-001/
406406 │ └─ prov/
407- │ └─ sub-001_prov-conversion_act .json
407+ │ └─ sub-001_prov-smoothing_act .json
408408 └─ prov/
409- ├─ prov-conversion_base.json
410- ├─ prov-conversion_soft.json
409+ ├─ prov-conversion_all.jsonld
411410 ├─ prov-smoothing_base.json
412- ├─ prov-smoothing_act.json
413411 ├─ prov-smoothing_soft.json
414412 ├─ prov-smoothing_ent.json
415413 └─ ...
@@ -685,11 +683,12 @@ A skeleton for a dataset level BIDS-Prov JSON-LD file looks like this:
685683}
686684```
687685
688- ## 4 Examples
686+ ## 4. Examples
689687
690688A list of examples for BIDS-Prov are available in https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples
691689
692- TODO: some examples are not merged yet.
690+ > [ !ERROR]
691+ > TODO: some examples are not merged yet.
693692
694693<table >
695694 <tr >
@@ -700,49 +699,49 @@ TODO: some examples are not merged yet.
700699 </tr >
701700
702701 <tr >
703- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/simple_example/ " >examples/ simple_example/</a >
702+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/simple_example/ " >simple_example/</a >
704703 </td >
705704 <td >A simple example describing the downsampling of EEG data using EEGLAB.
706705 </td >
707706 </tr >
708707
709708 <tr >
710- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/afni/ " >examples/ from_parsers/afni/</a >
709+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/afni/ " >from_parsers/afni/</a >
711710 </td >
712711 <td >A set of examples for fMRI processing using AFNI. These where generated generated from ...
713712 </td >
714713 </tr >
715714
716715 <tr >
717- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/fsl/ " >examples/ from_parsers/fsl/</a >
716+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/fsl/ " >from_parsers/fsl/</a >
718717 </td >
719718 <td >A set of examples for fMRI processing using FSL. These where generated generated from ...
720719 </td >
721720 </tr >
722721
723722 <tr >
724- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/spm/ " >examples/ from_parsers/spm/</a >
723+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/from_parsers/spm/ " >from_parsers/spm/</a >
725724 </td >
726725 <td >A set of examples for fMRI processing using SPM. These where generated generated from ...
727726 </td >
728727 </tr >
729728
730729 <tr >
731- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/dcm2niix/ " >examples/ dcm2niix/</a >
730+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/dcm2niix/ " >dcm2niix/</a >
732731 </td >
733732 <td >A set of examples describing dicom to nifti conversion using dcm2niix. These aim at showing different ways to organise the exact same provenance records inside a dataset.
734733 </td >
735734 </tr >
736735
737736 <tr >
738- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/heudiconv/ " >examples/ heudiconv/</a >
737+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/heudiconv/ " >heudiconv/</a >
739738 </td >
740739 <td >An example describing dicom to nifti conversion using heudiconv.
741740 </td >
742741 </tr >
743742
744743 <tr >
745- <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/nipype/ " >examples/ nipype/</a >
744+ <td ><a href =" https://github.com/bids-standard/BEP028_BIDSprov/tree/master/examples/nipype/ " >nipype/</a >
746745 </td >
747746 <td >An example describing simple processings on anatomical MRI using FSL through Nipype.
748747 </td >
@@ -751,7 +750,7 @@ TODO: some examples are not merged yet.
751750</table >
752751
753752
754- ## 5 Tools
753+ ## 5. Tools
755754
756755## 5 Future perspectives
757756
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