You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Copy file name to clipboardExpand all lines: bep028spec.md
+6-6Lines changed: 6 additions & 6 deletions
Display the source diff
Display the rich diff
Original file line number
Diff line number
Diff line change
@@ -128,12 +128,12 @@ A skeleton for a BIDS-Prov JSON-LD file looks like this:
128
128
<tr>
129
129
<td><code>Records</code>
130
130
</td>
131
-
<td>REQUIRED. A list of provenance records (Activity, Entity, Agent, Environement), describing the provenance (see the <ahref="#2-provenance-records">2. Provenance records</a> section below).
131
+
<td>REQUIRED. A list of provenance records (Activity, Entity, Agent, Environment), describing the provenance (see the <ahref="#2-provenance-records">2. Provenance records</a> section below).
132
132
</td>
133
133
</tr>
134
134
</table>
135
135
136
-
BIDS-Prov allows this skeleton to be splitted into several *JSON* files. This is described in sections [3.1.3 Suffixes](#3-1-3-suffixes)
136
+
BIDS-Prov allows this skeleton to be split into several *JSON* files. This is described in sections [3.1.3 Suffixes](#3-1-3-suffixes)
137
137
and [3.2 Provenance description levels](#3-2-provenance-description-levels).
138
138
139
139
Using tools provided by BIDS-Prov ([5. Tools](#5-tools)), these JSON contents can be merged back to a structured JSON-LD as described above.
@@ -514,7 +514,7 @@ BIDS-Prov metadata can be stored at different levels:
514
514
* inside dataset subdirectories ;
515
515
* at file level.
516
516
517
-
It is recommanded that the records are stored at the level they describe. E.g.:
517
+
It is recommended that the records are stored at the level they describe. E.g.:
518
518
* an Activity that generated as set of files for several subjects of the dataset must be described at the dataset level ;
519
519
* an Activity that generated as set of files for one subject only must be described at the subject's subdirectory level ;
520
520
* an Activity that generated one file only can be described at this file's level.
@@ -676,7 +676,7 @@ Here is an example of a `GeneratedByProv` field containing the IRI of an `Entity
676
676
677
677
### 3.3 Consistency of IRIs
678
678
679
-
BIDS-Prov recommands the following conventions in order to have consistant, human readable, and explicit IRIs[^3] as `Id` for provenance records objects. These principles also allow to identify where a record is described.
679
+
BIDS-Prov recommends the following conventions in order to have consistant, human readable, and explicit IRIs[^3] as `Id` for provenance records objects. These principles also allow to identify where a record is described.
680
680
681
681
IRIs identifying `Activity`, `Agent`, and `Environment` provenance records inside files stored in a directory `<directory>` relatively to a BIDS dataset `<dataset>` SHOULD have the following form, where `<label>` is a human readable label for the record and `<uid>` is a unique group of chars:
682
682
@@ -729,7 +729,7 @@ IRIs of provenance records defined in `prov/prov-dcm2niix_soft.json` should star
729
729
}
730
730
```
731
731
732
-
This `Agent` can be refered to in the `sub-001/prov/sub-001_prov-dcm2niix_act.json` file:
732
+
This `Agent` can be referred to in the `sub-001/prov/sub-001_prov-dcm2niix_act.json` file:
@@ -998,7 +998,7 @@ Details of the context, will encode terminology that is consistent across BIDS a
998
998
}
999
999
```
1000
1000
1001
-
Contexts are created at the BIDS organization level, and only if necessary extended by a dataset. Thus most dataset creators will be able to reuse existing contexts. For terms, many of these are already in BIDS, with additional ones being curated by the NIDM-terms grant. Additional, terms can and should be re-used from schema.org, bioschemas, and other ontologies and vocabularies whenever possible.
1001
+
Contexts are created at the BIDS organization level, and only if necessary extended by a dataset. Thus most dataset creators will be able to reuse existing contexts. For terms, many of these are already in BIDS, with additional ones being curated by the NIDM-terms grant. Additional, terms can and should be reused from schema.org, bioschemas, and other ontologies and vocabularies whenever possible.
0 commit comments