Even if Java's exceptions occurs, empty graph returns without any errors in search

[yasu-sh]

This is the small note to record a known issue:

If you use large datasets or sets many required edges, you may get empty graph without any errors.
This sympton is caused by the code as below:

r-causal/R/tetradrunner.R

Line 211 in 1649315

if(!is.null(e <- .jgetEx())){

	# Search
	tetrad_graph <- .jcall(algo_instance, "Ledu/cmu/tetrad/graph/Graph;", 
		"search", tetradData, parameters_instance, check=FALSE)

	if(!is.null(e <- .jgetEx())){
		.jclear()
		tetradrunner$nodes <- colnames(df)
		tetradrunner$edges <- NULL
		# print("Java exception was raised")
		# print(e)

This suppress the error like this:
Error in .jcall("RJavaArrayTools", "Z", "isArray", .jcast(o)) : java.lang.OutOfMemoryError: Java heap space

rJava documentation

.jgetEx polls for any pending exceptions and returns the exception object.