Get data from Yu et al (2011)

[cbergman]

• reference is http://www.ncbi.nlm.nih.gov/pubmed/21523651
• 4414-bp element, non-autonomous LTR element
• related to D. yakuba Pifo_I: http://www.girinst.org/protected/repbase_extract.php?access=Pifo_I
• state that insertion site is at 18,929,626 on chr2R

[cbergman]

• emailed corresponding author 2013-6-17

[cbergman]

• Data sent by Bo Yu on 2013-6-20, file is in https://github.com/bergmanlb/transposons/tree/master/personal_communications/yu

[cbergman]

• related to Tirant
• good hits on chrX in nest that currently has no homology to known TEs
• TE is in - orientation in Yu pers. com.
• incomplete element

[cbergman]

• need to revcomp, map to genome and try to find complete element