diff --git a/tools/rna_tools/cleaverna/.shed.yml b/tools/rna_tools/cleaverna/.shed.yml new file mode 100644 index 0000000000..7c8f7d82b5 --- /dev/null +++ b/tools/rna_tools/cleaverna/.shed.yml @@ -0,0 +1,10 @@ +name: cleaverna +owner: bgruening +remote_repository_url: "https://github.com/bgruening/galaxytools/tools/rna_tools/cleaverna" +homepage_url: "https://github.com/bgruening/galaxytools/tools/rna_tools/cleaverna" +categories: +- RNA +description: "Tool for DNAzyme" +long_description: | + "scoring candidate cleavage sites of DNAzyme" + diff --git a/tools/rna_tools/cleaverna/cleaverna.xml b/tools/rna_tools/cleaverna/cleaverna.xml new file mode 100644 index 0000000000..88c8e91b04 --- /dev/null +++ b/tools/rna_tools/cleaverna/cleaverna.xml @@ -0,0 +1,289 @@ + + scoring candidate cleavage sites of DNAzyme + + + + + + + macros.xml + + + + + + + + + + input/params.csv && + echo '$mode_selector.params_source.la,$mode_selector.params_source.ra,"#echo ",".join($mode_selector.params_source.cs)#",$mode_selector.params_source.tem,$mode_selector.params_source.ca' >> input/params.csv && + #end if + #for $f in $mode_selector.target_files_training + #if $f.element_identifier.endswith('.fasta'): + cp "$f" input/${f.element_identifier} && + #else + cp "$f" input/${f.element_identifier}.fasta && + #end if + #end for + cleaverna + --params input/params.csv + #for $f in $mode_selector.target_files_training + --target_files_training "input/${f.element_identifier}" + #end for + --prediction_mode default + --model_name "$model_name" + --output_dir output && + mv output/${model_name}_user_merged_num.csv output/training_output.csv + + #else + ## ---------- PREDICTION MODE ---------- + #if $mode_selector.prediction_mode_selector.prediction_mode == "default" + ## PARAMS + #set $params_file = $mode_selector.prediction_mode_selector.params_csv + ## training file + #if $mode_selector.prediction_mode_selector.training_file_source.training_file_method == "builtin" + #set $training_file = "$__tool_directory__/data/" + $mode_selector.prediction_mode_selector.training_file_source.training_builtin + #else + #set $training_file = $mode_selector.prediction_mode_selector.training_file_source.training_upload + #end if + ## training scores + #if $mode_selector.prediction_mode_selector.training_scores_source.scores_method == "builtin" + #set $training_scores = "$__tool_directory__/data/" + $mode_selector.prediction_mode_selector.training_scores_source.scores_builtin + #else + #set $training_scores = $mode_selector.prediction_mode_selector.training_scores_source.scores_upload + #end if + cleaverna \ + --prediction_mode default \ + --params "$params_file" \ + --model_name "$mode_selector.prediction_mode_selector.model_name" \ + #for $f in $mode_selector.prediction_mode_selector.target_files_prediction + --target_files_prediction "$f" \ + #end for + --training_file "$training_file"/*.csv \ + --training_scores "$training_scores" \ + --output_dir . + #elif $mode_selector.prediction_mode_selector.prediction_mode == "target_check" + ## params (multi-row repeat) + #set $params_file = $mode_selector.prediction_mode_selector.params_csv + ## training file + #if $mode_selector.prediction_mode_selector.training_file_source.training_file_method == "builtin" + #set $training_file = "$__tool_directory__/data/" + $mode_selector.prediction_mode_selector.training_file_source.training_builtin + #else + #set $training_file = $mode_selector.prediction_mode_selector.training_file_source.training_upload + #end if + + ## training scores + #if $mode_selector.prediction_mode_selector.training_scores_source.scores_method == "builtin" + #set $training_scores = "$__tool_directory__/data/" + $mode_selector.prediction_mode_selector.training_scores_source.scores_builtin + #else + #set $training_scores = $mode_selector.prediction_mode_selector.training_scores_source.scores_upload + #end if + + ## RUN + cleaverna \ + --prediction_mode target_check \ + --params "$params_file" \ + --model_name "$mode_selector.prediction_mode_selector.model_name" \ + #for $f in $mode_selector.prediction_mode_selector.target_files_prediction + --target_files_prediction "$f" \ + #end for + --training_file "$training_file"/*.csv \ + --training_scores "$training_scores" \ + --output_dir . + #elif $mode_selector.prediction_mode_selector.prediction_mode == "target_screen" + ## params + #set $params_file = $mode_selector.prediction_mode_selector.params_csv + ## training file + #if str($mode_selector.prediction_mode_selector.training_file_source.training_file_method) == "builtin" + #set $training_file = $__tool_directory__ + "/data/" + str($mode_selector.prediction_mode_selector.training_file_source.training_builtin) + #else + #set $training_file = $mode_selector.prediction_mode_selector.training_file_source.training_upload + #end if + ## training scores + #if str($mode_selector.prediction_mode_selector.training_scores_source.scores_method) == "builtin" + #set $training_scores = $__tool_directory__ + "/data/" + str($mode_selector.prediction_mode_selector.training_scores_source.scores_builtin) + #else + #set $training_scores = $mode_selector.prediction_mode_selector.training_scores_source.scores_upload + #end if + cleaverna \ + --prediction_mode target_screen \ + --params "$params_file" \ + --model_name "$mode_selector.prediction_mode_selector.model_name" \ + #for $f in $mode_selector.prediction_mode_selector.target_files_prediction + --target_files_prediction "$f" \ + #end for + --training_file "$training_file"/*.csv \ + --training_scores "$training_scores" \ + --output_dir . + ## Specific_query + #elif $mode_selector.prediction_mode_selector.prediction_mode == "specific_query" + ## params + #set $params_file = $mode_selector.prediction_mode_selector.params_csv + ## training file + #if str($mode_selector.prediction_mode_selector.training_file_source.training_file_method) == "builtin" + #set $training_file = $__tool_directory__ + "/data/" + str($mode_selector.prediction_mode_selector.training_file_source.training_builtin) + #else + #set $training_file = $mode_selector.prediction_mode_selector.training_file_source.training_upload + #end if + ## training scores + #if str($mode_selector.prediction_mode_selector.training_scores_source.scores_method) == "builtin" + #set $training_scores = $__tool_directory__ + "/data/" + str($mode_selector.prediction_mode_selector.training_scores_source.scores_builtin) + #else + #set $training_scores = $mode_selector.prediction_mode_selector.training_scores_source.scores_upload + #end if + cleaverna \ + --prediction_mode specific_query \ + --params "$params_file" \ + --model_name "$mode_selector.prediction_mode_selector.model_name" \ + #for $f in $mode_selector.prediction_mode_selector.target_files_prediction + --target_files_prediction "$f" \ + #end for + --training_file "$training_file"/*.csv \ + --training_scores "$training_scores" \ + --output_dir . + #end if + #end if + ]]> + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + mode_selector['mode'] == 'training' + + + mode_selector['mode'] == 'training' + + + mode_selector['mode'] == 'prediction' + + + mode_selector['mode'] == 'prediction' + + + mode_selector['mode'] == 'prediction' + + + mode_selector['mode'] == 'prediction' + + + mode_selector['mode'] == 'prediction' + + + mode_selector['mode'] == 'prediction' + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/tools/rna_tools/cleaverna/data/HPBC_target.csv b/tools/rna_tools/cleaverna/data/HPBC_target.csv new file mode 100644 index 0000000000..818b9dca5b --- /dev/null +++ b/tools/rna_tools/cleaverna/data/HPBC_target.csv @@ -0,0 +1,118 @@ +id2,Dz_seq,ML_training_score +AU-147-148,AAAGUCAUAGGCUAGCUACAACGAACCUCACGU,1 +AU-182-183,CCAUCUCUAGGCUAGCUACAACGAAUACUAUGC,1 +AU-188-189,GGAUUCCCAGGCUAGCUACAACGACUCUAUAUA,1 +AU-194-195,GCAUAUGGAGGCUAGCUACAACGAUCCCAUCUC,1 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b/tools/rna_tools/cleaverna/data/SARS_target.csv new file mode 100644 index 0000000000..2cb878fb99 --- /dev/null +++ b/tools/rna_tools/cleaverna/data/SARS_target.csv @@ -0,0 +1,227 @@ +id2,Dz_seq,ML_training_score +AU-204-205,ACGUUUGAUGAACACAGGCUAGCUACAACGAAGGGCUGU,0 +AU-243-244,AACCAUAACAUGACCAGGCUAGCUACAACGAGAGGUGCA,1 +AU-384-385,GCCACCAGCUCCUUUAGGCUAGCUACAACGAUACCGUUC,0 +GU-113-114,CGUGCCUCUGAUAAGAGGCUAGCUACAACGACUCCUCCA,0 +GU-161-162,CCUUUUUCAACUUCUAGGCUAGCUACAACGAUAAGCCAC,0 +GU-219-220,AGUUCGAGCAUCCGAAGGCUAGCUACAACGAGUUUGAUG,0 +GU-294-295,UGUCUCACCACUACGAGGCUAGCUACAACGACGUACUGA,0 +GU-315-316,AUGAGGGACAAGGACAGGCUAGCUACAACGACAAGUGUC,0 +GU-424-425,CGCCUAAGUCAAAUGAGGCUAGCUACAACGAUUUAGAUC,0 +GU-501-502,UUCACGGGUAACACCAGGCUAGCUACAACGAUGCUAUGU,0 +GU-77-78,AAGCCACGUACGAGCAGGCUAGCUACAACGAGUCGCGAA,0 +AU-1042-1043,GAGGACUCAGUAUUGAGGCUAGCUACAACGAUUCUGUUC,0 +AU-1323-1324,GGGUUUGAGUUUUUCAGGCUAGCUACAACGAAAACAGUG,0 +AU-1472-1473,UGAACACUCUCCUUAAGGCUAGCUACAACGAUUCCUUUG,1 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b/tools/rna_tools/cleaverna/data/SARS_user_merged_num.zip differ diff --git a/tools/rna_tools/cleaverna/macros.xml b/tools/rna_tools/cleaverna/macros.xml new file mode 100644 index 0000000000..8c6beb0e79 --- /dev/null +++ b/tools/rna_tools/cleaverna/macros.xml @@ -0,0 +1,123 @@ + + 1.0.2 + 0 + 21.01 + + + cleaverna + + + + cleaverna --help | head -1 + + + + + @unpublished{cleaverna2026, + author = {Reyhaneh Tavakoli and contributors}, + title = {CleaveRNA: Advanced machine learning-based computational tool for scoring candidate DNAzyme cleavage sites}, + year = {2026}, + url = {https://github.com/reyhaneh-tavakoli/CleaveRNA} + } + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + ^.+:\d+-\d+$ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Enter a nucleotide sequence using only A, U, C, G, T, or lowercase equivalents. + ^[AUCGTaucgt]+$ + + + + + diff --git a/tools/rna_tools/cleaverna/shed.yml b/tools/rna_tools/cleaverna/shed.yml new file mode 100644 index 0000000000..d4f2673361 --- /dev/null +++ b/tools/rna_tools/cleaverna/shed.yml @@ -0,0 +1,10 @@ +name: cleaverna +owner: bgruening +remote_repository_url: "https://github.com/bgruening/galaxytools" +homepage_url: "https://github.com/bgruening/galaxytools/tree/main/tools/rna_tools/cleaverna" +categories: +- RNA +description: "Tool for DNAzyme" +long_description: | + "scoring candidate cleavage sites of DNAzyme" + diff --git a/tools/rna_tools/cleaverna/test-data/.~lock.expected_output.csv# b/tools/rna_tools/cleaverna/test-data/.~lock.expected_output.csv# new file mode 100644 index 0000000000..33b40c2286 --- /dev/null +++ b/tools/rna_tools/cleaverna/test-data/.~lock.expected_output.csv# @@ -0,0 +1 @@ +,reytakop,reytakop,30.06.2026 19:50,file:///home/reytakop/.config/libreoffice/4; \ No newline at end of file diff --git a/tools/rna_tools/cleaverna/test-data/BCL-1.fasta b/tools/rna_tools/cleaverna/test-data/BCL-1.fasta new file mode 100644 index 0000000000..e264a4b458 --- /dev/null +++ b/tools/rna_tools/cleaverna/test-data/BCL-1.fasta @@ -0,0 +1,14 @@ +>BCL-1 +GTTGGCCCCCGTTACTTTTCCTCTGGGAAATATGGCGCACGCTGGGAGAACAGGGTACGATAACCGGGAG +ATAGTGATGAAGTACATCCATTATAAGCTGTCGCAGAGGGGCTACGAGTGGGATGCGGGAGATGTGGGCG +CCGCGCCCCCGGGGGCCGCCCCCGCGCCGGGCATCTTCTCCTCGCAGCCCGGGCACACGCCCCATACAGC +CGCATCCCGGGACCCGGTCGCCAGGACCTCGCCGCTGCAGACCCCGGCTGCCCCCGGCGCCGCCGCGGGG +CCTGCGCTCAGCCCGGTGCCACCTGTGGTCCACCTGACCCTCCGCCAGGCCGGCGACGACTTCTCCCGCC +GCTACCGCCGCGACTTCGCCGAGATGTCCAGGCAGCTGCACCTGACGCCCTTCACCGCGCGGGGACGCTT +TGCCACGGTGGTGGAGGAGCTCTTCAGGGACGGGGTGAACTGGGGGAGGATTGTGGCCTTCTTTGAGTTC +GGTGGGGTCATGTGTGTGGAGAGCGTCAACCGGGAGATGTCGCCCCTGGTGGACAACATCGCCCTGTGGA +TGACTGAGTACCTGAACCGGCACCTGCACACCTGGATCCAGGATAACGGAGGCTGGGATGCCTTTGTGGA +ACTGTACGGCCCCAGCATGCGGCCTCTGTTTGATTTCTCCTGGCTGTCTCTGAAGACTCTGCTCAGTTTG +GCCCTGGTGGGAGCTTGCATCACCCTGGGTGCCTATCTGGGCCACAAGTGAAGTCAACATGCCTGCCCCA +AACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATAATATGCATTGTCAGTGATGTTCCATGAAACAA +AGCTGCAGGCTGTTTAAGAAAAAATAACACACATATAAACATCACACACACAGACAGACACACACACACA diff --git a/tools/rna_tools/cleaverna/test-data/HPV.fasta b/tools/rna_tools/cleaverna/test-data/HPV.fasta new file mode 100644 index 0000000000..0915493eb9 --- /dev/null +++ b/tools/rna_tools/cleaverna/test-data/HPV.fasta @@ -0,0 +1,2 @@ +>HPV +AUGCACCAAAAGAGAACUGCAAUGUUUCAGGACCCACAGGAGCGACCCAGAAAGUUACCACAGUUAUGCACAGAGCUGCAAACAACUAUACAUGAUAUAAUAUUAGAAUGUGUGUACUGCAAGCAACAGUUACUGCGACGUGAGGUAUAUGACUUUGCUUUUCGGGAUUUAUGCAUAGUAUAUAGAGAUGGGAAUCCAUAUGCUGUAUGUGAUAAAUGUUUAAAGUUUUAUUCUAAAAUUAGUGAGUAUAGACAUUAUUGUUAUAGUUUGUAUGGAACAACAUUAGAACAGCAAUACAACAAACCGUUGUGUGAUUUGUUAAUUAGGUGUAUUAACUGUCAAAAGCCACUGUGUCCUGAAGAAAAGCAAAGACAUCUGGACAAAAAGCAAAGAUUCCAUAAUAUAAGGGGUCGGUGGACCGGUCGAUGUAUGUCUUGUUGCAGAUCAUCAAGAACACGUAGAGAAACCCAGCUGUAAUCAUGCAUGGAGAUACACCUACAUUGCAUGAAUAUAUGUUAGAUUUGCAACCAGAGACAACUGAUCUCUACUGUUAUGAGCAAUUAAAUGACAGCUCAGAGGAGGAGGAUGAAAUAGAUGGUCCAGCUGGACAAGCAGAACCGGACAGAGCCCAUUACAAUAUUGUAACCUUUUGUUGCAAGUGUGACUCUACGCUUCGGUUGUGCGUACAAAGCACACACGUAGACAUUCGUACUUUGGAAGACCUGUUAAUGGGCACACUAGGAAUUGUGUGCCCCAUCUGUUCUCAGAAACCAUAA diff --git a/tools/rna_tools/cleaverna/test-data/expected_output.csv b/tools/rna_tools/cleaverna/test-data/expected_output.csv new file mode 100644 index 0000000000..4a2e444c38 --- /dev/null +++ b/tools/rna_tools/cleaverna/test-data/expected_output.csv @@ -0,0 +1,223 @@ +id2,seq2,E_1,ED1_1,ED2_1,Pu1_1,Pu2_1,E_hybrid_1,P_E_1,seedNumber_1,seedEbest_1,E_2,ED1_2,ED2_2,Pu1_2,Pu2_2,E_hybrid_2,P_E_2,seedNumber_2,seedEbest_2,E_3,ED1_3,ED2_3,Pu1_3,Pu2_3,E_hybrid_3,P_E_3,seedNumber_3,seedEbest_3,E_diff_12,pumin1_4u,pumin5_8u,pumin1_4d,pumin5_8d,target_file +AC-114-115,UCCCACUCGGGCUAGCUACAACGAAGCCCCUCU,-17.19,6.04,7.61,5.54465e-05,4.34074e-06,-30.84,0.607743,10.0,-5.85,-17.19,6.04,7.61,5.54465e-05,4.34074e-06,-30.84,0.607742,10.0,-5.85,-3.18,7.61,7.61,4.34074e-06,4.34074e-06,-18.4,9.59763,1.0,-1.11,0.0,0.1124661,0.3519217,0.4543846,0.04529022,BCL-1.fasta +AC-14-15,GAGGAAAAGGGCUAGCUACAACGAAACGGGGGC,-15.58,10.05,1.85,8.28326e-08,0.0497033,-27.48,0.900693,6.0,-7.88,-15.58,10.05,1.85,8.28326e-08,0.0497033,-27.48,0.883593,6.0,-7.88,-11.5,1.03,1.03,0.18802,0.18802,-13.56,0.817919,4.0,-4.6,0.0,0.2201101,0.8702062,0.4532359,0.02852468,BCL-1.fasta 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+AC-395-396,UGAAGGGCGGGCUAGCUACAACGACAGGUGCAG,-19.73,5.65,3.83,0.000104398,0.00200062,-29.21,0.677288,10.0,-6.68,-19.73,5.65,3.83,0.000104398,0.00200062,-29.21,0.677177,10.0,-6.68,-7.9,3.4,2.82,0.00401946,0.0103007,-14.12,0.360835,4.0,-2.57,0.0,0.06450374,0.2934938,0.1746268,0.2331306,BCL-1.fasta +AC-404-405,CCCGCGCGGGGCUAGCUACAACGAGAAGGGCGU,-16.81,10.85,6.57,2.26191e-08,2.34642e-05,-34.23,0.728796,10.0,-5.75,-16.81,10.85,6.57,2.26191e-08,2.34642e-05,-34.23,0.720887,10.0,-5.75,-15.38,4.29,4.29,0.000948469,0.000948469,-23.96,0.966295,6.0,-3.53,0.0,0.2331306,0.1746268,0.04034132,0.05270324,BCL-1.fasta +AC-415-416,GGCAAAGCGGGCUAGCUACAACGACCCCGCGCG,-13.73,10.68,9.46,2.98035e-08,2.15749e-07,-33.87,12882000.0,1.0,-3.64,-13.73,10.68,9.46,2.98035e-08,2.15749e-07,-33.87,2883.37,1.0,-3.64,-4.12,1.13,1.13,0.159859,0.159859,-6.38,0.767755,2.0,-2.95,0.0,0.05270324,0.04034132,0.7117371,0.01429475,BCL-1.fasta 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+AC-50-51,CGUACCCUGGGCUAGCUACAACGAUCUCCCAGC,-17.34,6.74,6.36,1.7808e-05,3.29901e-05,-30.44,1350.32,7.0,-3.94,-17.34,6.74,6.36,1.7808e-05,3.29901e-05,-30.44,1349.95,7.0,-3.94,-3.98,6.36,6.36,3.29901e-05,3.29901e-05,-16.7,0.958091,2.0,-2.64,0.0,0.8786625,0.002538902,0.1476413,0.0960511,BCL-1.fasta +AC-519-520,AUCUCCCGGGGCUAGCUACAACGAUGACGCUCU,-17.02,7.66,3.82,4.00249e-06,0.00203335,-28.5,0.682518,10.0,-5.81,-17.02,7.66,3.82,4.00249e-06,0.00203335,-28.5,0.681801,10.0,-5.81,-10.14,2.38,2.38,0.0210338,0.0210338,-14.9,0.342735,4.0,-6.17,0.0,0.1051997,0.1867301,0.0445494,0.06421321,BCL-1.fasta +AC-543-544,GCGAUGUUGGGCUAGCUACAACGACCACCAGGG,-16.88,7.42,4.89,5.90811e-06,0.000358286,-29.19,0.963322,9.0,-5.62,-16.88,7.42,4.89,5.90811e-06,0.000358286,-29.19,0.963152,9.0,-5.62,-13.44,3.88,3.88,0.00184473,0.00184473,-21.2,0.859511,4.0,-5.17,0.0,0.2015969,0.2894155,0.2384211,0.1235724,BCL-1.fasta +AC-546-547,AGGGCGAUGGGCUAGCUACAACGAUGUCCACCA,-13.57,7.76,6.79,3.40302e-06,1.64203e-05,-28.12,1.14757,7.0,-6.39,-13.57,7.76,6.79,3.40302e-06,1.64203e-05,-28.12,1.13702,7.0,-6.39,-10.02,6.79,6.79,1.64203e-05,1.64203e-05,-23.6,0.68456,6.0,-5.01,0.0,0.4190969,0.2015969,0.1235724,0.14248,BCL-1.fasta +AC-563-564,GGUACUCAGGGCUAGCUACAACGACAUCCACAG,-18.9,5.59,1.72,0.000115072,0.0613749,-26.21,0.457144,10.0,-4.7,-18.9,5.59,1.72,0.000115072,0.0613749,-26.21,0.457128,10.0,-4.7,-11.96,1.72,1.72,0.0613749,0.0613749,-15.4,1.40779,4.0,-5.26,0.0,0.06978984,0.3054633,0.1442033,0.2811746,BCL-1.fasta +AC-57-58,CGGUUAUCGGGCUAGCUACAACGAACCCUGUUC,-16.44,4.31,4.29,0.000918185,0.000948469,-25.04,0.949959,8.0,-4.1,-16.44,4.31,4.29,0.000918185,0.000948469,-25.04,0.949737,8.0,-4.1,-11.82,4.29,4.29,0.000948469,0.000948469,-20.4,5.3585,4.0,-5.9,0.0,0.0960511,0.1476413,0.3910115,0.1169967,BCL-1.fasta +AC-570-571,CGGUUCAGGGGCUAGCUACAACGAACUCAGUCA,-17.28,4.13,4.27,0.00122961,0.000979753,-25.68,0.654084,10.0,-3.84,-17.28,4.13,4.27,0.00122961,0.000979753,-25.68,0.648957,10.0,-3.84,-12.46,4.27,4.27,0.000979753,0.000979753,-21.0,0.723078,6.0,-5.26,0.0,0.2811746,0.07390489,0.4048662,0.2795032,BCL-1.fasta +AC-576-577,AGGUGCCGGGGCUAGCUACAACGAUCAGGUACU,-17.63,4.14,7.23,0.00120982,8.04143e-06,-29.0,4.3342,4.0,-1.46,-17.63,4.14,7.23,0.00120982,8.04143e-06,-29.0,3.9337,4.0,-1.46,-11.22,0.87,0.87,0.243752,0.243752,-12.96,0.720865,4.0,-5.45,0.0,0.4874068,0.2811746,0.1361411,0.3457854,BCL-1.fasta +AC-582-583,GUGUGCAGGGGCUAGCUACAACGAGCCGGUUCA,-16.96,5.17,7.54,0.000227471,4.86283e-06,-29.67,0.550825,9.0,-6.38,-16.96,5.17,7.54,0.000227471,4.86283e-06,-29.67,0.550823,9.0,-6.38,-10.48,3.84,3.84,0.00196842,0.00196842,-18.16,454.578,2.0,-1.06,0.0,0.1361411,0.2795032,0.3457854,0.4693653,BCL-1.fasta +AC-588-589,AUCCAGGUGGGCUAGCUACAACGAGCAGGUGCC,-18.66,5.22,6.32,0.000209746,3.52023e-05,-30.2,0.668851,10.0,-6.5,-18.66,5.22,6.32,0.000209746,3.52023e-05,-30.2,0.667715,10.0,-6.5,-3.2,2.2,2.2,0.028168,0.028168,-7.6,0.970935,2.0,-0.61,0.0,0.3457854,0.1361411,0.3084528,0.1293603,BCL-1.fasta +AC-590-591,GGAUCCAGGGGCUAGCUACAACGAGUGCAGGUG,-19.96,6.56,4.14,2.38481e-05,0.00120982,-30.66,0.934955,10.0,-6.32,-19.96,6.56,4.14,2.38481e-05,0.00120982,-30.66,0.934657,10.0,-6.32,-10.14,0.83,0.83,0.260097,0.260097,-11.8,0.99373,2.0,-6.06,0.0,0.4214153,0.3457854,0.1293603,0.6176311,BCL-1.fasta +AC-606-607,CAGCCUCCGGGCUAGCUACAACGAUAUCCUGGA,-10.23,10.43,7.97,4.47128e-08,2.4204e-06,-28.63,0.356259,6.0,-5.12,-10.23,10.43,7.97,4.47128e-08,2.4204e-06,-28.63,0.351495,6.0,-5.12,-3.5,1.39,1.39,0.10484,0.10484,-6.28,0.498016,2.0,-0.14,0.0,0.1065776,0.03497824,0.02948893,0.003513222,BCL-1.fasta 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+AC-757-758,GCAGGCAUGGGCUAGCUACAACGAUGACUUCAC,-16.92,4.78,4.46,0.000428294,0.000719833,-26.16,0.960151,10.0,-4.17,-16.92,4.78,4.46,0.000428294,0.000719833,-26.16,0.958833,10.0,-4.17,-7.38,4.46,4.46,0.000719833,0.000719833,-16.3,0.418708,2.0,-4.02,0.0,0.3957323,0.2035851,0.342461,0.2785593,BCL-1.fasta +AC-772-773,GCAUAUUUGGGCUAGCUACAACGAUUGGGGCAG,-17.12,2.62,4.49,0.0142495,0.000685633,-24.23,0.946314,8.0,-7.19,-17.12,2.62,4.49,0.0142495,0.000685633,-24.23,0.946303,7.0,-7.19,-6.72,2.42,2.42,0.019712,0.019712,-11.56,0.38953,4.0,-1.99,0.0,0.7761497,0.2785593,0.6286004,0.09786568,BCL-1.fasta +AC-791-792,CUGCUUUAGGGCUAGCUACAACGAGAACCUUUU,-11.49,4.3,2.92,0.000933204,0.00875796,-18.71,1.23211,7.0,-4.2,-11.49,4.3,2.92,0.000933204,0.00875796,-18.71,0.642716,7.0,-4.2,-7.84,2.67,2.67,0.0131391,0.0131391,-13.18,0.262372,4.0,-3.04,0.0,0.1638932,0.6699167,0.1203405,0.1710696,BCL-1.fasta +AC-837-838,GCAGCUUUGGGCUAGCUACAACGAUUCAUGGAA,-10.14,6.52,4.93,2.54472e-05,0.000335771,-21.59,0.471156,5.0,-5.94,-10.14,6.52,4.93,2.54472e-05,0.000335771,-21.59,0.43011,5.0,-5.94,-7.18,0.11,0.11,0.836542,0.836542,-7.4,0.651362,4.0,-4.45,0.0,0.3792275,0.2127996,0.1910896,0.08731414,BCL-1.fasta +AC-84-85,UAAUGGAUGGGCUAGCUACAACGAACUUCAUCA,-10.45,4.5,3.5,0.000674599,0.00341745,-18.45,585.632,5.0,-2.21,-12.02,3.39,3.38,0.00408521,0.00415203,-18.79,0.723911,5.0,-5.81,-7.86,1.93,1.93,0.0436529,0.0436529,-11.72,0.301274,4.0,-3.66,-1.5700000000000005,0.9250559,0.07868727,0.2912521,0.1935058,BCL-1.fasta +AC-867-868,AUAUGUGUGGGCUAGCUACAACGAUAUUUUUUC,-7.49,0.27,5.32,0.645272,0.000178331,-13.08,0.700522,5.0,-1.91,-8.82,0.2,4.53,0.722884,0.000642548,-13.55,0.742689,4.0,-4.42,-5.86,5.27,5.27,0.000193402,0.000193402,-16.4,18.2366,2.0,-1.51,-1.33,0.9149196,0.9675694,0.9527298,0.8929089,BCL-1.fasta +AC-869-870,UUAUAUGUGGGCUAGCUACAACGAGUUAUUUUU,-7.11,0.24,2.21,0.677458,0.0277146,-9.56,0.561136,4.0,-2.71,-9.52,0.2,4.19,0.722884,0.00111555,-13.91,0.795047,4.0,-5.04,-7.18,4.39,4.39,0.000806413,0.000806413,-15.96,58.25,1.0,-1.36,-2.4099999999999997,0.9149196,0.9538518,0.9115068,0.8508802,BCL-1.fasta +AC-871-872,GUUUAUAUGGGCUAGCUACAACGAGUGUUAUUU,-11.43,0.33,2.08,0.585414,0.0342227,-13.84,6.66397,7.0,-3.72,-12.12,0.2,1.58,0.722884,0.0770269,-13.9,0.936378,4.0,-7.53,-9.84,1.61,1.61,0.0733674,0.0733674,-13.06,0.508903,4.0,-3.36,-0.6899999999999995,0.9492091,0.9149196,0.8929089,0.6875421,BCL-1.fasta +AC-879-880,UGUGUGAUGGGCUAGCUACAACGAUUAUAUGUG,-12.72,0.25,5.12,0.666555,0.000246694,-18.09,0.713228,8.0,-2.96,-12.72,0.25,5.12,0.666555,0.000246694,-18.09,0.699655,8.0,-2.96,-9.46,5.12,5.12,0.000246694,0.000246694,-19.7,2.07335,2.0,-5.26,0.0,0.7264621,0.8929089,0.6706561,0.7969733,BCL-1.fasta +AC-884-885,CUGUGUGUGGGCUAGCUACAACGAGAUGUUUAU,-13.29,0.24,6.27,0.677458,3.81771e-05,-19.8,2.51995,8.0,-4.52,-13.29,0.24,6.27,0.677458,3.81771e-05,-19.8,2.51821,8.0,-4.52,-6.08,6.26,6.26,3.88016e-05,3.88016e-05,-18.6,159.931,1.0,-0.94,0.0,0.6706561,0.6875421,0.7969733,0.956506,BCL-1.fasta +AC-886-887,GUCUGUGUGGGCUAGCUACAACGAGUGAUGUUU,-16.64,0.24,5.72,0.677458,9.3189e-05,-22.6,0.614965,10.0,-5.32,-16.64,0.24,5.72,0.677458,9.3189e-05,-22.6,0.614911,10.0,-5.32,-5.86,5.63,5.63,0.000107841,0.000107841,-17.12,25.3664,2.0,-1.29,0.0,0.7759055,0.6706561,0.9533032,0.934257,BCL-1.fasta +AC-888-889,CUGUCUGUGGGCUAGCUACAACGAGUGUGAUGU,-18.48,0.25,5.75,0.666555,8.87615e-05,-24.48,0.797976,10.0,-7.12,-18.48,0.25,5.75,0.666555,8.87615e-05,-24.48,0.797976,10.0,-7.12,-6.3,5.75,5.75,8.87615e-05,8.87615e-05,-17.8,62.1677,1.0,-1.11,0.0,0.7969733,0.6706561,0.956506,0.934257,BCL-1.fasta +AC-890-891,GUCUGUCUGGGCUAGCUACAACGAGUGUGUGAU,-21.16,0.23,3.96,0.68854,0.00162017,-25.35,0.730892,10.0,-6.33,-21.16,0.23,3.96,0.68854,0.00162017,-25.35,0.730885,10.0,-6.33,-7.46,3.92,3.92,0.00172881,0.00172881,-15.3,0.488721,4.0,-1.64,0.0,0.9533032,0.7759055,0.934257,0.9512116,BCL-1.fasta +AC-894-895,GUGUGUCUGGGCUAGCUACAACGACUGUGUGUG,-22.9,0.09,3.58,0.864134,0.00300144,-26.57,0.969978,10.0,-6.5,-22.9,0.09,3.58,0.864134,0.00300144,-26.57,0.968237,10.0,-6.5,-10.02,1.98,1.98,0.0402513,0.0402513,-13.98,1.67338,2.0,-0.63,0.0,0.934257,0.9533032,0.9512116,0.9853138,BCL-1.fasta +AC-898-899,GUGUGUGUGGGCUAGCUACAACGACUGUCUGUG,-19.96,0.11,6.49,0.836542,2.67165e-05,-26.56,0.74936,10.0,-7.17,-19.96,0.11,6.49,0.836542,2.67165e-05,-26.56,0.74936,10.0,-7.17,-6.02,6.49,6.49,2.67165e-05,2.67165e-05,-19.0,113.427,1.0,-1.05,0.0,0.9512116,0.934257,0.9853138,0.9915282,BCL-1.fasta +AC-900-901,GUGUGUGUGGGCUAGCUACAACGAGUCUGUCUG,-20.72,0.11,6.06,0.836542,5.36761e-05,-26.89,0.927191,10.0,-6.76,-20.72,0.11,6.06,0.836542,5.36761e-05,-26.89,0.926913,10.0,-6.76,-5.26,5.98,5.98,6.11158e-05,6.11158e-05,-17.22,35.4278,1.0,-0.67,0.0,0.9512116,0.934257,0.9915282,0.9943411,BCL-1.fasta +AC-902-903,UGUGUGUGGGCUAGCUACAACGAGUGUCUGUC,-16.46,0.11,5.73,0.836542,9.16891e-05,-22.3,0.466496,9.0,-7.11,-16.46,0.11,5.73,0.836542,9.16891e-05,-22.3,0.461384,9.0,-7.11,-5.92,5.72,5.72,9.3189e-05,9.3189e-05,-17.36,36.7289,1.0,-1.01,0.0,0.9796474,0.9512116,0.9915282,0.9964844,BCL-1.fasta +AC-904-905,UGUGUGGGCUAGCUACAACGAGUGUGUCUG,-13.75,0.06,1.48,0.907237,0.0905958,-15.29,0.887144,5.0,-5.76,-13.75,0.06,1.48,0.907237,0.0905958,-15.29,0.882941,5.0,-5.76,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.9915282,0.9512116,0.9943411,0.9974873,BCL-1.fasta +AC-906-907,UGUGGGCUAGCUACAACGAGUGUGUGUC,-14.57,0.05,0.47,0.922077,0.466457,-15.09,0.748562,5.0,-6.61,-14.57,0.05,0.47,0.922077,0.466457,-15.09,0.733741,5.0,-6.61,-6.46,4.46,4.46,0.000719833,0.000719833,-15.38,14.2646,1.0,-1.49,0.0,0.9915282,0.9796474,0.9964844,,BCL-1.fasta +AC-908-909,UGGGCUAGCUACAACGAGUGUGUGUG,-11.82,0.01,3.23,0.983906,0.00529614,-15.06,0.439469,5.0,-3.86,-11.82,0.01,3.23,0.983906,0.00529614,-15.06,0.303986,5.0,-3.86,-7.06,2.66,2.66,0.0133541,0.0133541,-12.38,0.566942,4.0,-1.96,0.0,0.9943411,0.9915282,0.9974873,,BCL-1.fasta +AU-123-124,UCUCCCGCAGGCUAGCUACAACGACCCACUCGU,-20.68,6.95,2.73,1.26659e-05,0.0119203,-30.36,0.646011,10.0,-5.6,-20.68,6.95,2.73,1.26659e-05,0.0119203,-30.36,0.646008,10.0,-5.6,-11.04,1.18,1.18,0.147403,0.147403,-13.4,0.805412,4.0,-4.29,0.0,0.04529022,0.4543846,0.03574447,0.05561546,BCL-1.fasta +AU-132-133,GCGCCCACAGGCUAGCUACAACGACUCCCGCAU,-17.08,10.22,4.5,6.28651e-08,0.000674599,-31.8,0.617625,10.0,-6.48,-17.08,10.22,4.5,6.28651e-08,0.000674599,-31.8,0.617385,10.0,-6.48,-6.46,3.47,3.47,0.00358791,0.00358791,-13.4,0.721211,4.0,-1.03,0.0,0.05561546,0.03574447,0.190993,0.1475453,BCL-1.fasta +AU-173-174,AGGAGAAGAGGCUAGCUACAACGAGCCCGGCGC,-17.04,8.87,5.74,5.61948e-07,9.02135e-05,-31.65,0.747761,9.0,-6.92,-17.04,8.87,5.74,5.61948e-07,9.02135e-05,-31.65,0.747758,9.0,-6.92,-1.32,5.74,5.74,9.02135e-05,9.02135e-05,-12.8,2.38312,1.0,-0.11,0.0,0.05575178,0.3414455,0.3612059,0.6924177,BCL-1.fasta +AU-204-205,GCGGCUGUAGGCUAGCUACAACGAGGGGCGUGU,-21.61,3.81,7.51,0.00206661,5.10539e-06,-32.93,0.779427,10.0,-9.09,-21.61,3.81,7.51,0.00206661,5.10539e-06,-32.93,0.779427,10.0,-9.09,-6.74,3.31,3.31,0.00465143,0.00465143,-13.36,0.472189,4.0,-2.82,0.0,0.08910715,0.07417066,0.5918472,0.1864162,BCL-1.fasta +AU-214-215,GUCCCGGGAGGCUAGCUACAACGAGCGGCUGUA,-20.44,5.74,6.4,9.02135e-05,3.0917e-05,-32.58,0.761058,10.0,-6.19,-20.44,5.74,6.4,9.02135e-05,3.0917e-05,-32.58,0.761057,10.0,-6.19,-15.04,0.28,0.28,0.634887,0.634887,-15.6,0.51607,4.0,-10.48,0.0,0.1864162,0.5918472,0.218371,0.1036355,BCL-1.fasta +AU-30-31,UGCGCCAUAGGCUAGCUACAACGAUUCCCAGAG,-11.8,8.04,3.5,2.16053e-06,0.00341745,-23.34,0.526882,9.0,-5.11,-11.8,8.04,3.5,2.16053e-06,0.00341745,-23.34,0.514008,9.0,-5.11,-6.58,3.41,3.41,0.00395477,0.00395477,-13.4,0.652572,2.0,-1.4,0.0,0.1835799,0.02852468,0.5178081,0.2366594,BCL-1.fasta +AU-32-33,CGUGCGCCAGGCUAGCUACAACGAAUUUCCCAG,-15.8,7.46,2.67,5.53684e-06,0.0131391,-25.93,0.74684,10.0,-5.35,-15.8,7.46,2.67,5.53684e-06,0.0131391,-25.93,0.746795,10.0,-5.35,-9.26,2.67,2.67,0.0131391,0.0131391,-14.6,0.575199,4.0,-3.42,0.0,0.6272847,0.08246332,0.2366594,0.02394555,BCL-1.fasta +AU-374-375,GCCUGGACAGGCUAGCUACAACGACUCGGCGAA,-18.14,6.17,5.92,4.49023e-05,6.73648e-05,-30.23,0.480008,9.0,-6.88,-18.14,6.17,5.92,4.49023e-05,6.73648e-05,-30.23,0.480008,9.0,-6.88,-12.88,4.87,4.87,0.000370103,0.000370103,-22.62,0.992873,2.0,-3.76,0.0,0.2296085,0.3649332,0.1762733,0.07014096,BCL-1.fasta +AU-470-471,AGGCCACAAGGCUAGCUACAACGACCUCCCCCA,-19.08,8.94,0.05,5.01615e-07,0.922077,-28.07,0.594361,8.0,-6.63,-19.08,8.94,0.05,5.01615e-07,0.922077,-28.07,0.59436,8.0,-6.63,-2.2,1.64,0.02,0.0698817,0.96807,-3.86,0.347875,1.0,-2.2,0.0,0.05575747,0.04002592,0.9131753,0.04196638,BCL-1.fasta +AU-500-501,CCACACACAGGCUAGCUACAACGAGACCCCACC,-25.05,4.18,1.38,0.0011338,0.106555,-30.61,0.96777,10.0,-7.3,-25.05,4.18,1.38,0.0011338,0.106555,-30.61,0.967769,10.0,-7.3,-10.74,1.33,1.33,0.11556,0.11556,-13.4,0.842109,4.0,-4.0,0.0,0.1965861,0.4153685,0.387433,0.2050419,BCL-1.fasta +AU-527-528,GGGGCGACAGGCUAGCUACAACGACUCCCGGUU,-16.18,9.89,5.75,1.07386e-07,8.87615e-05,-31.82,0.567354,10.0,-5.44,-16.18,9.89,5.75,1.07386e-07,8.87615e-05,-31.82,0.566964,10.0,-5.44,-13.7,5.75,5.75,8.87615e-05,8.87615e-05,-25.2,51.54,4.0,-4.86,0.0,0.06421321,0.0445494,0.2205746,0.2543226,BCL-1.fasta +AU-548-549,ACAGGGCGAGGCUAGCUACAACGAGUUGUCCAC,-12.85,7.67,6.92,3.93808e-06,1.32977e-05,-27.44,20.1137,5.0,-6.16,-12.85,7.67,6.92,3.93808e-06,1.32977e-05,-27.44,19.0816,5.0,-6.16,-10.16,6.92,6.92,1.32977e-05,1.32977e-05,-24.0,0.798952,6.0,-4.26,0.0,0.2384211,0.2015969,0.1235724,0.14248,BCL-1.fasta +AU-560-561,ACUCAGUCAGGCUAGCUACAACGACCACAGGGC,-19.97,6.79,2.25,1.64203e-05,0.025973,-29.01,0.878964,10.0,-6.07,-19.97,6.79,2.25,1.64203e-05,0.025973,-29.01,0.875441,10.0,-6.07,-11.36,1.02,1.02,0.191095,0.191095,-13.4,0.630695,4.0,-5.02,0.0,0.2065447,0.14248,0.06978984,0.3142804,BCL-1.fasta +AU-596-597,UAUCCUGGAGGCUAGCUACAACGACCAGGUGUG,-13.41,6.02,7.15,5.72753e-05,9.15599e-06,-26.58,0.76108,3.0,-0.99,-13.41,6.02,7.15,5.72753e-05,9.15599e-06,-26.58,0.759981,3.0,-0.99,-10.86,1.27,1.27,0.127376,0.127376,-13.4,0.846873,4.0,-5.09,0.0,0.1293603,0.3193511,0.04758493,0.03497824,BCL-1.fasta +AU-60-61,UCCCGGUUAGGCUAGCUACAACGACGUACCCUG,-20.02,4.17,3.09,0.00115234,0.00664678,-27.28,0.688622,10.0,-7.84,-20.02,4.17,3.09,0.00115234,0.00664678,-27.28,0.688494,10.0,-7.84,-10.04,3.08,3.08,0.0067555,0.0067555,-16.2,1.2384,4.0,-4.11,0.0,0.1559203,0.0960511,0.4856088,0.1169967,BCL-1.fasta +AU-603-604,CCUCCGUUAGGCUAGCUACAACGACCUGGAUCC,-14.55,8.65,4.0,8.0301e-07,0.00151836,-27.2,0.724263,9.0,-5.2,-14.55,8.65,4.0,8.0301e-07,0.00151836,-27.2,0.72349,9.0,-5.2,-11.6,4.0,4.0,0.00151836,0.00151836,-19.6,15.46,4.0,-4.17,0.0,0.03497824,0.6176311,0.06395745,0.02948893,BCL-1.fasta +AU-618-619,ACAAAGGCAGGCUAGCUACAACGACCCAGCCUC,-8.91,12.7,6.62,1.12425e-09,2.16358e-05,-28.23,15.9831,3.0,-2.52,-9.89,6.16,3.25,4.56368e-05,0.00512703,-19.3,0.875881,2.0,-5.74,-6.9,3.25,3.25,0.00512703,0.00512703,-13.4,0.863824,4.0,-1.39,-0.9800000000000004,0.264799,0.003513222,0.07659396,0.1770678,BCL-1.fasta +AU-647-648,GAGGCCGCAGGCUAGCUACAACGAGCUGGGGCC,-14.5,8.9,13.79,5.3525e-07,1.91772e-10,-37.19,0.953219,6.0,-1.69,-14.5,8.9,13.79,5.3525e-07,1.91772e-10,-37.19,0.953214,6.0,-1.69,-4.44,1.88,1.88,0.0473419,0.0473419,-8.2,0.843514,2.0,-2.08,0.0,0.1878484,0.2763666,0.04835364,0.0327634,BCL-1.fasta +AU-663-664,CAGGAGAAAGGCUAGCUACAACGACAAACAGAG,-13.8,6.01,0.55,5.82122e-05,0.409674,-20.36,0.592278,10.0,-6.29,-13.8,6.01,0.55,5.82122e-05,0.409674,-20.36,0.590682,10.0,-6.29,-12.42,0.49,0.49,0.451563,0.451563,-13.4,0.636192,4.0,-5.67,0.0,0.4205641,0.3022703,0.6719498,0.305113,BCL-1.fasta +AU-71-72,UCAUCACUAGGCUAGCUACAACGACUCCCGGUU,-18.64,4.02,2.13,0.00146988,0.031556,-24.79,0.548517,10.0,-7.2,-18.64,4.02,2.13,0.00146988,0.031556,-24.79,0.54851,10.0,-7.2,-10.72,1.32,1.32,0.11745,0.11745,-13.36,0.833823,4.0,-3.8,0.0,0.3470443,0.1169967,0.04652902,0.07868727,BCL-1.fasta +AU-719-720,CCAGGGUGAGGCUAGCUACAACGAGCAAGCUCC,-14.25,5.1,6.72,0.000254831,1.83953e-05,-26.07,1.78458,5.0,-7.68,-14.25,5.1,6.72,0.000254831,1.83953e-05,-26.07,1.78307,5.0,-7.68,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.3254956,0.08015681,0.6389159,0.2506221,BCL-1.fasta +AU-735-736,UGGCCCAGAGGCUAGCUACAACGAAGGCACCCA,-15.23,8.96,7.67,4.85598e-07,3.93808e-06,-31.86,0.492312,9.0,-4.61,-15.23,8.96,7.67,4.85598e-07,3.93808e-06,-31.86,0.492306,9.0,-4.61,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.01981313,0.05617346,0.03227146,0.02615458,BCL-1.fasta +AU-759-760,GGGCAGGCAGGCUAGCUACAACGAGUUGACUUC,-19.16,4.76,4.26,0.00044242,0.000995779,-28.18,0.924201,10.0,-6.9,-19.16,4.76,4.26,0.00044242,0.000995779,-28.18,0.9242,10.0,-6.9,-7.94,0.79,0.79,0.277537,0.277537,-9.52,0.682627,4.0,-1.65,0.0,0.4540352,0.3459826,0.3067879,0.2785593,BCL-1.fasta +AU-77-78,UGUACUUCAGGCUAGCUACAACGACACUAUCUC,-14.94,3.54,1.73,0.0032027,0.0603871,-20.21,0.71256,9.0,-3.04,-14.94,3.54,1.73,0.0032027,0.0603871,-20.21,0.712509,9.0,-3.04,-10.94,1.73,1.73,0.0603871,0.0603871,-14.4,0.962055,4.0,-3.69,0.0,0.04652902,0.2084515,0.08022801,0.335297,BCL-1.fasta +AU-776-777,UUUUGCAUAGGCUAGCUACAACGAUUGUUUGGG,-11.92,2.67,2.56,0.0131391,0.0157065,-17.15,0.391415,8.0,-4.47,-11.92,2.67,2.56,0.0131391,0.0157065,-17.15,0.38984,9.0,-4.47,-9.72,1.69,1.69,0.0644363,0.0644363,-13.1,0.681516,4.0,-3.16,0.0,0.6286004,0.7761497,0.09786568,0.2891314,BCL-1.fasta +AU-778-779,CCUUUUGCAGGCUAGCUACAACGAAUUUGUUUG,-10.93,2.89,2.26,0.0091948,0.025555,-16.08,0.925824,8.0,-2.57,-12.2,5.23,1.5,0.00020637,0.0877031,-18.93,6.10829,2.0,-1.89,-10.02,1.46,1.46,0.093584,0.093584,-12.94,0.476525,4.0,-3.83,-1.2699999999999996,0.6510904,0.6286004,0.09786568,0.6699167,BCL-1.fasta +AU-806-807,UGCAUAUUAGGCUAGCUACAACGAUUCUACUGC,-13.05,3.77,1.64,0.00220518,0.0698817,-18.46,0.73188,7.0,-3.63,-13.05,3.77,1.64,0.00220518,0.0698817,-18.46,0.730037,7.0,-3.63,-10.28,1.54,1.54,0.0821919,0.0821919,-13.36,0.814544,4.0,-3.83,0.0,0.2606664,0.1597732,0.8024842,0.06321846,BCL-1.fasta +AU-809-810,CAAUGCAUAGGCUAGCUACAACGAUAUUUCUAC,-9.97,4.32,1.29,0.000903407,0.123309,-15.58,1.53133,4.0,-1.44,-9.97,4.32,1.29,0.000903407,0.123309,-15.58,0.837779,4.0,-1.44,-10.86,1.27,1.27,0.127376,0.127376,-13.4,0.801916,4.0,-3.87,0.0,0.3767207,0.1597732,0.08675827,0.06321846,BCL-1.fasta +AU-811-812,GACAAUGCAGGCUAGCUACAACGAAUUAUUUCU,-9.55,4.56,1.76,0.000612021,0.0575181,-15.87,0.737975,5.0,-1.61,-9.69,0.19,1.08,0.734709,0.173369,-10.96,0.225382,3.0,-6.06,-11.22,1.09,1.09,0.170579,0.170579,-13.4,0.721427,4.0,-4.23,-0.1399999999999988,0.8024842,0.2606664,0.06321846,0.1589181,BCL-1.fasta +AU-815-816,CACUGACAAGGCUAGCUACAACGAGCAUAUUAU,-8.92,6.2,0.58,4.2769e-05,0.390211,-15.7,3.60604,5.0,-3.4,-8.92,6.2,0.58,4.2769e-05,0.390211,-15.7,1.7569,5.0,-3.4,-7.9,2.75,2.75,0.0115397,0.0115397,-13.4,0.663728,4.0,-1.92,0.0,0.06321846,0.8024842,0.1589181,0.04143621,BCL-1.fasta +AU-825-826,CAUGGAACAGGCUAGCUACAACGACACUGACAA,-14.04,6.59,1.63,2.2715e-05,0.0710248,-22.26,0.547833,10.0,-5.48,-14.04,6.59,1.63,2.2715e-05,0.0710248,-22.26,0.54743,10.0,-5.48,-10.4,1.5,1.5,0.0877031,0.0877031,-13.4,0.657166,4.0,-4.98,0.0,0.04143621,0.2393837,0.05898857,0.8360063,BCL-1.fasta +AU-832-833,UUUGUUUCAGGCUAGCUACAACGAGGAACAUCA,-8.11,5.62,4.12,0.000109605,0.00124973,-17.85,226.963,2.0,-1.73,-9.65,0.19,1.14,0.734709,0.157287,-10.98,0.954085,3.0,-5.83,-11.08,1.14,1.14,0.157287,0.157287,-13.36,0.759082,4.0,-4.96,-1.540000000000001,0.05898857,0.09865057,0.3792275,0.1910896,BCL-1.fasta +AU-864-865,UGUGUGUUAGGCUAGCUACAACGAUUUUUCUUA,-9.67,0.29,3.59,0.624668,0.00295313,-13.55,0.50711,8.0,-4.2,-9.67,0.29,3.59,0.624668,0.00295313,-13.55,0.470103,8.0,-4.2,-8.22,3.59,3.59,0.00295313,0.00295313,-15.4,0.773916,4.0,-2.21,0.0,0.9646138,0.9014625,0.9149196,0.9115068,BCL-1.fasta +AU-873-874,AUGUUUAUAGGCUAGCUACAACGAGUGUGUUAU,-9.38,0.37,3.85,0.548627,0.00193674,-13.6,0.38905,10.0,-4.67,-9.38,0.37,3.85,0.548627,0.00193674,-13.6,0.369308,10.0,-4.67,-6.64,3.1,3.1,0.0065398,0.0065398,-12.84,6.05867,2.0,-0.5,0.0,0.9115068,0.9149196,0.8508802,0.6706561,BCL-1.fasta +AU-875-876,UGAUGUUUAGGCUAGCUACAACGAAUGUGUGUU,-12.97,0.36,2.76,0.557601,0.011354,-16.09,0.445477,10.0,-6.41,-12.97,0.36,2.76,0.557601,0.011354,-16.09,0.443272,10.0,-6.41,-11.22,2.74,2.74,0.0117285,0.0117285,-16.7,2.96757,4.0,-3.53,0.0,0.8929089,0.9492091,0.6875421,0.6706561,BCL-1.fasta +AU-881-882,UGUGUGUGAGGCUAGCUACAACGAGUUUAUAUG,-13.98,0.22,3.8,0.699803,0.00210041,-18.0,0.639519,9.0,-4.81,-13.98,0.22,3.8,0.699803,0.00210041,-18.0,0.638808,9.0,-4.81,-7.78,3.79,3.79,0.00213477,0.00213477,-15.36,0.417064,4.0,-2.99,0.0,0.6706561,0.8508802,0.7759055,0.9533032,BCL-1.fasta +AU-90-91,AGCUUAUAAGGCUAGCUACAACGAGGAUGUACU,-10.42,2.29,0.93,0.0243409,0.221141,-13.64,0.494794,5.0,-4.31,-10.42,2.29,0.93,0.0243409,0.221141,-13.64,0.466904,5.0,-4.31,-2.86,3.02,3.02,0.00744624,0.00744624,-8.9,0.569318,2.0,-0.08,0.0,0.2912521,0.335297,0.1935058,0.07464232,BCL-1.fasta +AU-93-94,GACAGCUUAGGCUAGCUACAACGAAAUGGAUGU,-10.84,5.62,4.24,0.000109605,0.00102862,-20.7,0.777667,8.0,-4.74,-10.84,5.62,4.24,0.000109605,0.00102862,-20.7,0.775835,8.0,-4.74,-7.1,3.73,3.73,0.00235305,0.00235305,-14.56,0.503527,4.0,-0.2,0.0,0.1935058,0.2912521,0.4483188,0.07464232,BCL-1.fasta +GC-103-104,GCCCCUCUGGGCUAGCUACAACGAGACAGCUUA,-15.78,5.48,7.9,0.000137557,2.71152e-06,-29.16,0.813878,6.0,-6.09,-15.78,5.48,7.9,0.000137557,2.71152e-06,-29.16,0.813763,6.0,-6.09,-2.14,1.48,1.48,0.0905958,0.0905958,-5.1,0.450017,2.0,-1.64,0.0,0.0830713,0.07464232,0.5592075,0.1124661,BCL-1.fasta +GC-111-112,CACUCGUAGGGCUAGCUACAACGACCCUCUGCG,-14.89,6.54,6.88,2.46346e-05,1.41894e-05,-28.31,0.689591,8.0,-3.86,-14.89,6.54,6.88,2.46346e-05,1.41894e-05,-28.31,0.689571,8.0,-3.86,-6.06,6.87,6.87,1.44215e-05,1.44215e-05,-19.8,3.24032,4.0,-2.06,0.0,0.2334086,0.5592075,0.1441741,0.4543846,BCL-1.fasta +GC-125-126,CAUCUCCCGGGCUAGCUACAACGAAUCCCACUC,-18.67,7.29,2.82,7.29548e-06,0.0103007,-28.78,0.955904,9.0,-5.37,-18.67,7.29,2.82,7.29548e-06,0.0103007,-28.78,0.955814,9.0,-5.37,-7.76,2.48,2.48,0.0178835,0.0178835,-12.72,0.283983,4.0,-2.37,0.0,0.04529022,0.09510292,0.0374863,0.3100575,BCL-1.fasta +GC-138-139,GGCGCGGCGGGCUAGCUACAACGACCACAUCUC,-14.42,12.08,5.64,3.07432e-09,0.000106105,-32.14,0.678704,10.0,-4.54,-14.42,12.08,5.64,3.07432e-09,0.000106105,-32.14,0.631238,10.0,-4.54,-12.72,5.64,5.64,0.000106105,0.000106105,-24.0,525.056,4.0,-3.27,0.0,0.1475453,0.3100575,0.265187,0.1484342,BCL-1.fasta +GC-140-141,GGGGCGCGGGGCUAGCUACAACGAGCCCACAUC,-12.65,2.47,2.9,0.018176,0.00904682,-18.02,0.613825,4.0,-6.2,-12.65,2.47,2.9,0.018176,0.00904682,-18.02,0.401611,4.0,-6.2,-11.44,11.23,11.23,1.22097e-08,1.22097e-08,-33.9,1.78261,2.0,-4.61,0.0,0.1475453,0.1979782,0.2295315,0.1484342,BCL-1.fasta +GC-143-144,CCGGGGGCGGGCUAGCUACAACGAGGCGCCCAC,-15.18,13.6,10.41,2.61018e-10,4.61876e-08,-39.19,0.944116,8.0,-6.64,-15.18,13.6,10.41,2.61018e-10,4.61876e-08,-39.19,0.935613,8.0,-6.64,-10.56,0.98,0.98,0.203909,0.203909,-12.52,0.749694,4.0,-4.86,0.0,0.265187,0.1475453,0.1484342,0.2187793,BCL-1.fasta +GC-145-146,CCCCGGGGGGGCUAGCUACAACGAGCGGCGCCC,-15.56,13.67,12.76,2.32994e-10,1.01996e-09,-41.99,0.803502,6.0,-7.31,-15.56,13.67,12.76,2.32994e-10,1.01996e-09,-41.99,0.803497,6.0,-7.31,-11.3,3.42,3.42,0.00389112,0.00389112,-18.14,0.885274,4.0,-6.35,0.0,0.2295315,0.1475453,0.1793032,0.1636137,BCL-1.fasta +GC-155-156,CGGGGGCGGGGCUAGCUACAACGACCCCGGGGG,-13.84,14.03,12.69,1.29918e-10,1.14264e-09,-40.56,0.780246,5.0,-5.22,-13.84,14.03,12.69,1.29918e-10,1.14264e-09,-40.56,0.664683,5.0,-5.22,-11.72,12.69,12.69,1.14264e-09,1.14264e-09,-37.1,2.77321,2.0,-4.63,0.0,0.1465395,0.3300102,0.09671912,0.1752284,BCL-1.fasta +GC-158-159,GCGCGGGGGGGCUAGCUACAACGAGGCCCCCGG,-12.13,13.64,15.22,2.44616e-10,1.8842e-11,-40.99,520.583,3.0,-6.06,-12.13,13.64,15.22,2.44616e-10,1.8842e-11,-40.99,150.357,3.0,-6.06,-5.36,15.22,15.22,1.8842e-11,1.8842e-11,-35.8,2.37475,2.0,-0.72,0.0,0.1465395,0.1636137,0.09671912,0.04510109,BCL-1.fasta +GC-164-165,UGCCCGGCGGGCUAGCUACAACGAGGGGGCGGC,-18.05,11.69,9.56,5.78848e-09,1.83435e-07,-39.3,0.737617,8.0,-4.75,-18.05,11.69,9.56,5.78848e-09,1.83435e-07,-39.3,0.726032,8.0,-4.75,-11.08,7.14,7.14,9.30577e-06,9.30577e-06,-25.36,0.742011,2.0,-3.0,0.0,0.1752284,0.09671912,0.3414455,0.05575178,BCL-1.fasta +GC-166-167,GAUGCCCGGGGCUAGCUACAACGAGCGGGGGCG,-15.77,11.13,10.98,1.43606e-08,1.83177e-08,-37.88,0.896214,4.0,-2.31,-15.77,11.13,10.98,1.43606e-08,1.83177e-08,-37.88,0.892782,4.0,-2.31,-5.76,3.72,3.72,0.00239154,0.00239154,-13.2,0.844444,2.0,-0.48,0.0,0.04510109,0.09671912,0.1995292,0.05575178,BCL-1.fasta +GC-171-172,GAGAAGAUGGGCUAGCUACAACGACCGGCGCGG,-16.97,9.01,4.41,4.47759e-07,0.000780665,-30.39,0.956333,10.0,-4.25,-16.97,9.01,4.41,4.47759e-07,0.000780665,-30.39,0.956297,10.0,-4.25,-6.94,3.13,3.13,0.00622909,0.00622909,-13.2,0.40194,4.0,-0.76,0.0,0.1995292,0.04510109,0.09141351,0.7029591,BCL-1.fasta +GC-184-185,CCCGGGCUGGGCUAGCUACAACGAGAGGAGAAG,-17.3,9.55,4.43,1.86436e-07,0.000755738,-31.28,0.761732,7.0,-6.95,-17.3,9.55,4.43,1.86436e-07,0.000755738,-31.28,0.723426,7.0,-6.95,-12.68,3.75,3.75,0.00227792,0.00227792,-20.18,0.552085,4.0,-1.31,0.0,0.6924177,0.7029591,0.03225867,0.08146573,BCL-1.fasta +GC-187-188,GUGCCCGGGGGCUAGCUACAACGAUGCGAGGAG,-20.32,9.42,4.75,2.30216e-07,0.000449657,-34.49,0.934576,9.0,-7.26,-20.32,9.42,4.75,2.30216e-07,0.000449657,-34.49,0.933501,9.0,-7.26,-13.82,3.88,3.88,0.00184473,0.00184473,-21.58,65.1482,2.0,-5.11,0.0,0.2695277,0.6924177,0.03225867,0.1370183,BCL-1.fasta +GC-193-194,GGGCGUGUGGGCUAGCUACAACGACCGGGCUGC,-15.53,9.65,10.11,1.58513e-07,7.51488e-08,-35.29,0.941116,6.0,-6.23,-15.53,9.65,10.11,1.58513e-07,7.51488e-08,-35.29,0.941,6.0,-6.23,-7.2,10.1,10.1,7.63781e-08,7.63781e-08,-27.4,1284.88,2.0,-1.24,0.0,0.08146573,0.03225867,0.2187121,0.07417066,BCL-1.fasta +GC-199-200,UGUAUGGGGGGCUAGCUACAACGAGUGUGCCCG,-10.05,1.03,0.01,0.18802,0.983906,-11.09,0.525699,4.0,-5.02,-10.05,1.03,0.01,0.18802,0.983906,-11.09,0.524892,4.0,-5.02,-0.28,0.0,0.0,1.0,1.0,-0.28,0.385086,1.0,-0.28,0.0,0.6546739,0.08691443,0.08910715,0.5918472,BCL-1.fasta +GC-209-210,GGGAUGCGGGGCUAGCUACAACGAUGUAUGGGG,-22.56,4.13,2.76,0.00122961,0.011354,-29.45,0.953167,10.0,-6.15,-22.56,4.13,2.76,0.00122961,0.011354,-29.45,0.953146,10.0,-6.15,-10.28,1.49,1.49,0.0891378,0.0891378,-13.26,0.625704,4.0,-4.36,0.0,0.5918472,0.2167416,0.1864162,0.218371,BCL-1.fasta +GC-212-213,CCCGGGAUGGGCUAGCUACAACGAGGCUGUAUG,-17.3,5.71,6.76,9.47133e-05,1.72394e-05,-29.77,0.984309,9.0,-4.04,-17.3,5.71,6.76,9.47133e-05,1.72394e-05,-29.77,0.984309,9.0,-4.04,-8.2,2.51,2.51,0.0170338,0.0170338,-13.22,0.973534,2.0,-5.55,0.0,0.2546758,0.5918472,0.2369333,0.1036355,BCL-1.fasta +GC-230-231,AGGUCCUGGGGCUAGCUACAACGAGACCGGGUC,-15.95,8.09,7.72,1.99218e-06,3.63121e-06,-31.76,0.755271,4.0,-4.59,-15.95,8.09,7.72,1.99218e-06,3.63121e-06,-31.76,0.75318,4.0,-4.59,-9.94,0.82,0.82,0.264351,0.264351,-11.58,0.564824,4.0,-5.17,0.0,0.02049646,0.5195477,0.2387814,0.03820165,BCL-1.fasta +GC-241-242,CUGCAGCGGGGCUAGCUACAACGAGAGGUCCUG,-15.2,8.24,8.43,1.56182e-06,1.14748e-06,-31.87,49.6206,5.0,-5.07,-15.2,8.24,8.43,1.56182e-06,1.14748e-06,-31.87,49.6064,6.0,-5.07,-7.8,0.0,0.0,1.0,1.0,-7.8,0.879109,2.0,-6.15,0.0,0.1970385,0.03820165,0.120715,0.1030275,BCL-1.fasta +GC-244-245,GGUCUGCAGGGCUAGCUACAACGAGGCGAGGUC,-19.4,7.21,5.13,8.30665e-06,0.000242723,-31.74,0.946107,10.0,-5.44,-19.4,7.21,5.13,8.30665e-06,0.000242723,-31.74,0.946104,10.0,-5.44,-10.94,5.13,5.13,0.000242723,0.000242723,-21.2,31.4991,4.0,-3.17,0.0,0.120715,0.1970385,0.1030275,0.4499594,BCL-1.fasta +GC-247-248,CGGGGUCUGGGCUAGCUACAACGAAGCGGCGAG,-19.33,7.74,5.3,3.51527e-06,0.000184213,-32.37,0.811868,9.0,-7.94,-19.33,7.74,5.3,3.51527e-06,0.000184213,-32.37,0.811843,9.0,-7.94,-6.98,3.09,3.09,0.00664678,0.00664678,-13.16,0.919853,2.0,-1.65,0.0,0.2247994,0.120715,0.2775634,0.3457937,BCL-1.fasta +GC-257-258,CGGGGGCAGGGCUAGCUACAACGACGGGGUCUG,-21.58,6.51,4.61,2.58634e-05,0.00056433,-32.7,0.466595,9.0,-6.89,-21.58,6.51,4.61,2.58634e-05,0.00056433,-32.7,0.466593,9.0,-6.89,-9.98,4.61,4.61,0.00056433,0.00056433,-19.2,3.75806,4.0,-1.82,0.0,0.07017793,0.4499594,0.3913351,0.2852106,BCL-1.fasta +GC-260-261,CGCCGGGGGGGCUAGCUACAACGAAGCCGGGGU,-20.14,6.61,8.16,2.19897e-05,1.77829e-06,-34.91,0.526444,8.0,-5.38,-20.14,6.61,8.16,2.19897e-05,1.77829e-06,-34.91,0.525971,8.0,-5.38,-10.86,0.99,0.99,0.200627,0.200627,-12.84,0.467237,4.0,-5.41,0.0,0.04776277,0.3457937,0.3281239,0.02806831,BCL-1.fasta +GC-267-268,GCGGCGGCGGGCUAGCUACAACGACGGGGGCAG,-19.98,11.72,5.74,5.51347e-09,9.02135e-05,-37.44,0.549451,10.0,-7.08,-19.98,11.72,5.74,5.51347e-09,9.02135e-05,-37.44,0.544564,10.0,-7.08,-9.12,5.74,5.74,9.02135e-05,9.02135e-05,-20.6,0.594702,4.0,-4.27,0.0,0.03321834,0.3913351,0.3131592,0.02844946,BCL-1.fasta +GC-269-270,CCGCGGCGGGGCUAGCUACAACGAGCCGGGGGC,-14.45,12.85,12.21,8.8138e-10,2.48968e-09,-39.51,0.942166,2.0,-1.38,-15.3,0.2,1.1,0.722884,0.167833,-16.6,0.750723,5.0,-8.89,-11.2,0.86,0.86,0.24774,0.24774,-12.92,0.687041,4.0,-6.01,-0.8500000000000014,0.02806831,0.3281239,0.02844946,0.05596563,BCL-1.fasta +GC-272-273,GCCCCGCGGGGCUAGCUACAACGAGGCGCCGGG,-12.16,16.62,11.53,1.9436e-12,7.50429e-09,-40.31,0.432156,6.0,-4.49,-12.66,8.96,3.93,4.85598e-07,0.00170098,-25.55,0.431439,5.0,-2.88,-13.34,9.86,9.86,1.12742e-07,1.12742e-07,-33.06,0.993921,4.0,-3.27,-0.5,0.3131592,0.02806831,0.05596563,0.005823789,BCL-1.fasta +GC-275-276,CAGGCCCCGGGCUAGCUACAACGAGGCGGCGCC,-12.85,16.9,8.67,1.23397e-12,7.7737e-07,-38.42,0.883387,9.0,-2.14,-12.85,16.9,8.67,1.23397e-12,7.7737e-07,-38.42,0.682255,9.0,-2.14,-9.52,1.17,1.17,0.149814,0.149814,-11.86,0.585978,4.0,-4.53,0.0,0.02844946,0.02806831,0.005823789,0.07625847,BCL-1.fasta +GC-280-281,GAGCGCAGGGGCUAGCUACAACGACCCGCGGCG,-13.73,14.26,8.86,8.94535e-11,5.7114e-07,-36.85,6.54605,5.0,-2.22,-13.73,14.26,8.86,8.94535e-11,5.7114e-07,-36.85,6.45591,5.0,-2.22,-7.7,0.26,0.26,0.655827,0.655827,-8.22,0.58113,2.0,-5.36,0.0,0.005823789,0.02844946,0.1234113,0.1412631,BCL-1.fasta +GC-284-285,GGCUGAGCGGGCUAGCUACAACGAAGGCCCCGC,-12.97,11.49,11.0,8.00748e-09,1.77328e-08,-35.46,31.9729,4.0,-7.1,-12.97,11.49,11.0,8.00748e-09,1.77328e-08,-35.46,30.887,4.0,-7.1,-1.02,0.01,3.5,0.983906,0.00341745,-4.53,0.468396,1.0,-1.02,0.0,0.07625847,0.005823789,0.1412631,0.2257704,BCL-1.fasta +GC-286-287,CGGGCUGAGGGCUAGCUACAACGAGCAGGCCCC,-11.36,13.01,11.74,6.79858e-10,5.33743e-09,-36.11,0.605359,5.0,-7.21,-11.36,13.01,11.74,6.79858e-10,5.33743e-09,-36.11,0.553158,5.0,-7.21,-4.52,11.74,11.74,5.33743e-09,5.33743e-09,-28.0,0.857725,2.0,-2.24,0.0,0.1234113,0.005823789,0.2714613,0.2257704,BCL-1.fasta +GC-291-292,GGCACCGGGGGCUAGCUACAACGAUGAGCGCAG,-21.58,7.84,4.68,2.98877e-06,0.000503741,-34.1,0.925164,10.0,-5.57,-21.58,7.84,4.68,2.98877e-06,0.000503741,-34.1,0.921705,10.0,-5.57,-8.04,4.68,4.68,0.000503741,0.000503741,-17.4,1.13147,4.0,-4.52,0.0,0.2714613,0.1234113,0.01875886,0.03009849,BCL-1.fasta +GC-298-299,CACAGGUGGGGCUAGCUACAACGAACCGGGCUG,-15.45,9.36,6.73,2.53755e-07,1.80993e-05,-31.54,0.739609,8.0,-3.88,-15.45,9.36,6.73,2.53755e-07,1.80993e-05,-31.54,0.737671,8.0,-3.88,-7.6,0.3,0.3,0.614615,0.614615,-8.2,0.693708,2.0,-5.29,0.0,0.01875886,0.2257704,0.2802299,0.3388487,BCL-1.fasta +GC-324-325,CCGGCCUGGGGCUAGCUACAACGAGGAGGGUCA,-17.54,9.23,7.28,3.13343e-07,7.41481e-06,-34.05,0.566308,9.0,-5.55,-17.54,9.23,7.28,3.13343e-07,7.41481e-06,-34.05,0.563057,9.0,-5.55,-11.64,7.28,7.28,7.41481e-06,7.41481e-06,-26.2,1.3135,4.0,-6.36,0.0,0.5108666,0.1769588,0.1311227,0.0275303,BCL-1.fasta +GC-329-330,CGUCGCCGGGGCUAGCUACAACGACUGGCGGAG,-14.35,8.73,10.71,7.05258e-07,2.83876e-08,-33.79,0.903839,4.0,-3.5,-14.35,8.73,10.71,7.05258e-07,2.83876e-08,-33.79,0.895486,4.0,-3.5,-11.14,0.13,0.13,0.809831,0.809831,-11.4,0.533952,4.0,-6.62,0.0,0.1311227,0.1959784,0.01123481,0.03886988,BCL-1.fasta +GC-333-334,AAGUCGUCGGGCUAGCUACAACGACGGCCUGGC,-9.04,8.99,12.04,4.62527e-07,3.28046e-09,-30.07,0.567104,7.0,-2.68,-9.04,8.99,12.04,4.62527e-07,3.28046e-09,-30.07,0.4767,7.0,-2.68,-8.92,12.04,12.04,3.28046e-09,3.28046e-09,-33.0,2.95418,4.0,-3.33,0.0,0.0275303,0.1311227,0.03886988,0.3830385,BCL-1.fasta +GC-348-349,CGGUAGCGGGGCUAGCUACAACGAGGGAGAAGU,-16.25,5.84,6.95,7.67018e-05,1.26659e-05,-29.04,0.545649,6.0,-7.93,-16.25,5.84,6.95,7.67018e-05,1.26659e-05,-29.04,0.5438,6.0,-7.93,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.2422023,0.7687979,0.1183162,0.7075594,BCL-1.fasta +GC-35-36,CAGCGUGCGGGCUAGCUACAACGACAUAUUUCC,-11.86,8.62,3.76,8.43064e-07,0.00224126,-24.24,0.961982,5.0,-2.42,-11.86,8.62,3.76,8.43064e-07,0.00224126,-24.24,0.457794,5.0,-2.42,-13.48,3.76,3.76,0.00224126,0.00224126,-21.0,189.639,4.0,-3.01,0.0,0.5178081,0.1835799,0.190828,0.002538902,BCL-1.fasta +GC-351-352,CGGCGGUAGGGCUAGCUACAACGAGGCGGGAGA,-20.66,6.44,5.73,2.89742e-05,9.16891e-05,-32.83,0.62155,10.0,-8.58,-20.66,6.44,5.73,2.89742e-05,9.16891e-05,-32.83,0.621465,10.0,-8.58,-8.14,5.73,5.73,9.16891e-05,9.16891e-05,-19.6,7.9118,4.0,-3.23,0.0,0.1069583,0.6086169,0.3341125,0.1004707,BCL-1.fasta +GC-357-358,AAGUCGCGGGGCUAGCUACAACGAGGUAGCGGC,-13.57,6.79,9.92,1.64203e-05,1.02284e-07,-30.28,0.570974,6.0,-3.95,-13.57,6.79,9.92,1.64203e-05,1.02284e-07,-30.28,0.570142,6.0,-3.95,-4.64,1.53,1.53,0.0835363,0.0835363,-7.7,0.450566,2.0,-4.31,0.0,0.7075594,0.1183162,0.1080991,0.0375701,BCL-1.fasta +GC-360-361,GCGAAGUCGGGCUAGCUACAACGAGGCGGUAGC,-17.16,6.79,6.54,1.64203e-05,2.46346e-05,-30.49,0.984119,9.0,-3.59,-17.16,6.79,6.54,1.64203e-05,2.46346e-05,-30.49,0.983981,9.0,-3.59,-6.88,6.53,6.53,2.50376e-05,2.50376e-05,-19.94,3.07824,4.0,-0.19,0.0,0.1004707,0.3341125,0.0375701,0.3649332,BCL-1.fasta +GC-368-369,ACAUCUCGGGGCUAGCUACAACGAGAAGUCGCG,-11.79,6.65,7.35,2.06079e-05,6.61872e-06,-25.79,0.704998,6.0,-3.96,-11.8,0.2,1.3,0.722884,0.121324,-13.3,0.299791,4.0,-6.81,-11.2,7.35,7.35,6.61872e-06,6.61872e-06,-25.9,1.29137,2.0,-4.57,-0.0100000000000015,0.3649332,0.0375701,0.6018499,0.2296085,BCL-1.fasta +GC-37-38,CCCAGCGUGGGCUAGCUACAACGAGCCAUAUUU,-14.18,7.78,4.17,3.29437e-06,0.00115234,-26.13,118.354,4.0,-3.31,-14.18,7.78,4.17,3.29437e-06,0.00115234,-26.13,110.526,4.0,-3.31,-5.04,5.85,5.85,7.54673e-05,7.54673e-05,-16.74,3.55145,2.0,-0.68,0.0,0.2366594,0.6516359,0.02394555,0.002538902,BCL-1.fasta +GC-382-383,GUGCAGCUGGGCUAGCUACAACGACUGGACAUC,-14.03,7.59,6.27,4.48391e-06,3.81771e-05,-27.89,0.919949,10.0,-4.75,-14.03,7.59,6.27,4.48391e-06,3.81771e-05,-27.89,0.903514,10.0,-4.75,-11.06,6.27,6.27,3.81771e-05,3.81771e-05,-23.6,1.46938,4.0,-5.86,0.0,0.07014096,0.1766951,0.2934528,0.2934938,BCL-1.fasta +GC-385-386,CAGGUGCAGGGCUAGCUACAACGAUGCCUGGAC,-15.28,7.69,7.59,3.81233e-06,4.48391e-06,-30.56,29615.3,5.0,-3.23,-15.28,7.69,7.59,3.81233e-06,4.48391e-06,-30.56,466.161,5.0,-3.23,-9.02,7.59,7.59,4.48391e-06,4.48391e-06,-24.2,0.890271,4.0,-4.5,0.0,0.07014096,0.1762733,0.2934938,0.06450374,BCL-1.fasta +GC-388-389,CGUCAGGUGGGCUAGCUACAACGAAGCUGCCUG,-12.27,7.07,9.95,1.0425e-05,9.74243e-08,-29.29,0.90274,6.0,-4.09,-12.27,7.07,9.95,1.0425e-05,9.74243e-08,-29.29,0.836666,6.0,-4.09,-2.6,2.8,2.8,0.0106405,0.0106405,-8.2,0.494158,2.0,-0.21,0.0,0.3686103,0.07014096,0.06450374,0.1409059,BCL-1.fasta +GC-397-398,GGUGAAGGGGGCUAGCUACAACGAGUCAGGUGC,-21.27,5.44,3.45,0.00014678,0.00370625,-30.16,0.974521,9.0,-5.39,-21.27,5.44,3.45,0.00014678,0.00370625,-30.16,0.963156,9.0,-5.39,-7.36,2.76,2.76,0.011354,0.011354,-12.88,0.360498,4.0,-2.25,0.0,0.1409059,0.06450374,0.1847581,0.2331306,BCL-1.fasta +GC-407-408,GUCCCCGCGGGCUAGCUACAACGAGGUGAAGGG,-16.15,11.15,5.93,1.39021e-08,6.62806e-05,-33.23,0.955602,8.0,-3.97,-16.15,11.15,5.93,1.39021e-08,6.62806e-05,-33.23,0.954385,8.0,-3.97,-9.14,5.93,5.93,6.62806e-05,6.62806e-05,-21.0,0.56646,4.0,-5.05,0.0,0.2246654,0.2450773,0.04034132,0.1608957,BCL-1.fasta +GC-409-410,GCGUCCCCGGGCUAGCUACAACGAGCGGUGAAG,-16.25,11.92,4.71,3.9856e-09,0.000479808,-32.88,0.923494,8.0,-5.57,-16.25,11.92,4.71,3.9856e-09,0.000479808,-32.88,0.923092,8.0,-5.57,-9.78,4.17,4.17,0.00115234,0.00115234,-18.12,0.835113,2.0,-5.91,0.0,0.04034132,0.2331306,0.05270324,0.4985409,BCL-1.fasta +GC-41-42,UUCUCCCAGGGCUAGCUACAACGAGUGCGCCAU,-13.73,7.86,6.67,2.89334e-06,1.99499e-05,-28.26,1.41409,7.0,-6.7,-13.73,7.86,6.67,2.89334e-06,1.99499e-05,-28.26,1.41281,7.0,-6.7,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.02394555,0.2366594,0.002538902,0.8786625,BCL-1.fasta +GC-417-418,GUGGCAAAGGGCUAGCUACAACGAGUCCCCGCG,-13.1,6.46,9.54,2.80491e-05,1.89486e-07,-29.1,0.97291,6.0,-2.28,-13.1,6.46,9.54,2.80491e-05,1.89486e-07,-29.1,0.97108,6.0,-2.28,-3.04,3.96,0.8,0.00162017,0.27307,-7.8,0.491167,1.0,-3.04,0.0,0.1608957,0.05270324,0.5086497,0.01429475,BCL-1.fasta +GC-422-423,CCACCGUGGGGCUAGCUACAACGAAAAGCGUCC,-15.63,8.66,4.91,7.90086e-07,0.000346846,-29.2,0.958006,9.0,-5.09,-15.63,8.66,4.91,7.90086e-07,0.000346846,-29.2,0.91167,9.0,-5.09,-9.98,4.91,4.91,0.000346846,0.000346846,-19.8,16.524,4.0,-3.09,0.0,0.5086497,0.4985409,0.01429475,0.1621554,BCL-1.fasta +GC-439-440,CCUGAAGAGGGCUAGCUACAACGAUCCUCCACC,-13.14,10.38,4.82,4.84914e-08,0.00040138,-28.34,0.800787,7.0,-5.49,-16.53,7.23,4.82,8.04143e-06,0.00040138,-28.58,0.73438,5.0,-4.64,-6.56,4.82,4.82,0.00040138,0.00040138,-16.2,0.960671,2.0,-3.48,-3.390000000000001,0.1451938,0.03342268,0.01386702,0.04371995,BCL-1.fasta +GC-476-477,CAAAGAAGGGGCUAGCUACAACGACACAAUCCU,-14.28,5.69,1.73,9.78372e-05,0.0603871,-21.7,0.814025,8.0,-4.21,-14.73,0.2,1.69,0.722884,0.0644363,-16.62,0.550262,5.0,-8.34,-10.06,1.4,1.4,0.103153,0.103153,-12.86,0.440452,4.0,-4.65,-0.450000000000001,0.9015774,0.06997196,0.04196638,0.07768738,BCL-1.fasta +GC-513-514,CGGUUGACGGGCUAGCUACAACGAUCUCCACAC,-16.36,6.98,3.73,1.20642e-05,0.00235305,-27.07,0.936726,7.0,-4.79,-16.36,6.98,3.73,1.20642e-05,0.00235305,-27.07,0.935634,7.0,-4.79,-13.74,3.73,3.73,0.00235305,0.00235305,-21.2,93.6673,4.0,-5.36,0.0,0.2571731,0.2050419,0.1051997,0.1199537,BCL-1.fasta +GC-532-533,CACCAGGGGGGCUAGCUACAACGAGACAUCUCC,-14.31,11.54,4.61,7.38352e-09,0.00056433,-30.46,0.946682,7.0,-5.1,-15.0,3.29,3.02,0.00480485,0.00744624,-21.31,0.428498,6.0,-7.22,-7.5,2.4,2.4,0.0203622,0.0203622,-12.3,0.303571,4.0,-3.25,-0.6899999999999995,0.2205746,0.06421321,0.2543226,0.2717457,BCL-1.fasta +GC-551-552,UCCACAGGGGGCUAGCUACAACGAGAUGUUGUC,-13.01,7.54,5.34,4.86283e-06,0.000172637,-25.89,52.1933,5.0,-5.25,-16.09,2.55,1.74,0.0159634,0.0594152,-20.38,0.53382,6.0,-8.41,-9.94,0.78,0.78,0.282077,0.282077,-11.5,0.563274,4.0,-5.74,-3.08,0.1235724,0.4230927,0.14248,0.2065447,BCL-1.fasta +GC-580-581,GUGCAGGUGGGCUAGCUACAACGACGGUUCAGG,-20.27,4.61,5.12,0.00056433,0.000246694,-30.0,0.975816,10.0,-6.72,-20.27,4.61,5.12,0.00056433,0.000246694,-30.0,0.975816,10.0,-6.72,-6.36,5.12,5.12,0.000246694,0.000246694,-16.6,12.3433,1.0,-1.76,0.0,0.1877505,0.4874068,0.3457854,0.4214153,BCL-1.fasta +GC-586-587,CCAGGUGUGGGCUAGCUACAACGAAGGUGCCGG,-20.4,5.76,6.23,8.7333e-05,4.07371e-05,-32.39,0.977088,9.0,-6.36,-20.4,5.76,6.23,8.7333e-05,4.07371e-05,-32.39,0.977087,9.0,-6.36,-7.64,1.18,1.18,0.147403,0.147403,-10.0,0.985737,2.0,-3.87,0.0,0.3457854,0.1361411,0.4693653,0.1293603,BCL-1.fasta +GC-612-613,GCAUCCCAGGGCUAGCUACAACGACUCCGUUAU,-13.04,9.43,3.14,2.26511e-07,0.00612884,-25.61,13.9672,8.0,-5.7,-13.35,6.24,1.23,4.00814e-05,0.135917,-20.82,0.510823,3.0,-5.81,-11.02,1.22,1.22,0.13814,0.13814,-13.46,0.849304,4.0,-4.24,-0.3100000000000005,0.02948893,0.06395745,0.003513222,0.09256998,BCL-1.fasta +GC-620-621,CCACAAAGGGGCUAGCUACAACGAAUCCCAGCC,-12.91,11.75,4.27,5.25152e-09,0.000979753,-28.93,805.061,4.0,-4.55,-12.91,11.75,4.27,5.25152e-09,0.000979753,-28.93,2.83496,4.0,-4.55,-6.06,4.27,4.27,0.000979753,0.000979753,-14.6,0.536072,2.0,-2.68,0.0,0.4106478,0.003513222,0.07659396,0.1770678,BCL-1.fasta +GC-639-640,AUGCUGGGGGGCUAGCUACAACGACGUACAGUU,-11.19,7.24,7.25,7.912e-06,7.78466e-06,-25.68,0.460603,7.0,-4.68,-12.13,2.55,5.08,0.0159634,0.000263236,-19.76,0.577275,5.0,-5.78,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,-0.9400000000000012,0.176,0.4544913,0.1878484,0.2416129,BCL-1.fasta +GC-645-646,GGCCGCAUGGGCUAGCUACAACGAUGGGGCCGU,-10.93,9.03,14.44,4.33462e-07,6.67973e-11,-34.4,11134.9,1.0,-0.19,-10.93,9.03,14.44,4.33462e-07,6.67973e-11,-34.4,2.3159,1.0,-0.19,-10.02,14.44,14.44,6.67973e-11,6.67973e-11,-38.9,5.58385,2.0,-5.25,0.0,0.1878484,0.176,0.2580276,0.0327634,BCL-1.fasta +GC-649-650,CAGAGGCCGGGCUAGCUACAACGAAUGCUGGGG,-18.05,6.88,7.45,1.41894e-05,5.62741e-06,-32.38,0.977327,7.0,-4.98,-18.05,6.88,7.45,1.41894e-05,5.62741e-06,-32.38,0.977321,7.0,-4.98,-4.0,7.45,7.45,5.62741e-06,5.62741e-06,-18.9,0.689579,2.0,-3.33,0.0,0.2580276,0.1878484,0.0327634,0.05443724,BCL-1.fasta +GC-652-653,AAACAGAGGGGCUAGCUACAACGACGCAUGCUG,-13.08,6.94,3.52,1.28731e-05,0.00330833,-23.54,0.203508,9.0,-4.56,-13.08,6.94,3.52,1.28731e-05,0.00330833,-23.54,0.16634,9.0,-4.56,-6.84,3.17,3.17,0.00583766,0.00583766,-13.18,0.471436,4.0,-1.15,0.0,0.04835364,0.2416129,0.04604711,0.3022703,BCL-1.fasta +GC-673-674,CAGAGACAGGGCUAGCUACAACGACAGGAGAAA,-18.07,5.6,0.72,0.00011322,0.310919,-24.39,0.482258,10.0,-6.32,-18.07,5.6,0.72,0.00011322,0.310919,-24.39,0.481958,10.0,-6.32,-12.32,0.58,0.58,0.390211,0.390211,-13.48,0.70305,4.0,-5.55,0.0,0.02250808,0.6719498,0.1513813,0.3010546,BCL-1.fasta +GC-691-692,CAAACUGAGGGCUAGCUACAACGAAGAGUCUUC,-11.12,4.84,5.49,0.000388564,0.000135343,-21.45,706.488,2.0,-0.63,-11.12,4.84,5.49,0.000388564,0.000135343,-21.45,166.122,2.0,-0.63,-3.02,5.49,5.49,0.000135343,0.000135343,-14.0,6.7634,1.0,-1.15,0.0,0.2032037,0.1036035,0.1073059,0.3689784,BCL-1.fasta +GC-701-702,CCACCAGGGGGCUAGCUACAACGACAAACUGAG,-15.1,9.6,2.13,1.71908e-07,0.031556,-26.83,0.914283,8.0,-2.94,-16.05,4.66,2.02,0.000520356,0.0377219,-22.73,0.314716,6.0,-5.43,-11.78,0.67,0.67,0.337194,0.337194,-13.12,0.720663,4.0,-5.68,-0.9500000000000012,0.05212867,0.1073059,0.02133583,0.01468688,BCL-1.fasta +GC-713-714,UGAUGCAAGGGCUAGCUACAACGAUCCCACCAG,-13.42,9.56,3.19,1.83435e-07,0.00565126,-26.17,0.64921,10.0,-5.71,-13.82,4.18,2.5,0.0011338,0.0173125,-20.5,0.381082,6.0,-5.5,-9.02,3.19,3.19,0.00565126,0.00565126,-15.4,2.70792,4.0,-1.93,-0.4000000000000003,0.01468688,0.04825443,0.2773454,0.6389159,BCL-1.fasta +GC-717-718,AGGGUGAUGGGCUAGCUACAACGAAAGCUCCCA,-10.91,8.77,8.24,6.6094e-07,1.56182e-06,-27.92,1.82164,5.0,-8.21,-10.91,8.77,8.24,6.6094e-07,1.56182e-06,-27.92,1.76962,5.0,-8.21,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.2773454,0.01468688,0.6389159,0.6600046,BCL-1.fasta +GC-731-732,CCAGAUAGGGGCUAGCUACAACGAACCCAGGGU,-15.05,10.03,4.4,8.55647e-08,0.000793435,-29.48,0.770158,8.0,-4.84,-15.05,10.03,4.4,8.55647e-08,0.000793435,-29.48,0.757215,8.0,-4.84,-7.4,0.41,0.41,0.514151,0.514151,-8.22,0.40733,2.0,-5.04,0.0,0.05617346,0.4343972,0.01981313,0.03227146,BCL-1.fasta +GC-741-742,CACUUGUGGGGCUAGCUACAACGACCAGAUAGG,-14.64,5.1,5.96,0.000254831,6.31316e-05,-25.7,0.957409,6.0,-3.31,-14.64,5.1,5.96,0.000254831,6.31316e-05,-25.7,0.952216,6.0,-3.31,-5.92,5.69,5.69,9.78372e-05,9.78372e-05,-17.3,0.256149,4.0,-3.38,0.0,0.03227146,0.04271639,0.07193442,0.3941832,BCL-1.fasta +GC-761-762,UGGGGCAGGGGCUAGCUACAACGAAUGUUGACU,-18.75,4.05,5.02,0.00140004,0.000290151,-27.82,0.63063,9.0,-8.18,-18.75,4.05,5.02,0.00140004,0.000290151,-27.82,0.630307,9.0,-8.18,-8.02,2.75,2.75,0.0115397,0.0115397,-13.52,0.7994,4.0,-2.21,0.0,0.4660118,0.3957323,0.2785593,0.4961843,BCL-1.fasta +GC-765-766,UGUUUGGGGGGCUAGCUACAACGAAGGCAUGUU,-17.35,2.98,4.19,0.00794554,0.00111555,-24.52,0.371875,9.0,-7.18,-17.35,2.98,4.19,0.00794554,0.00111555,-24.52,0.363988,9.0,-7.18,-11.22,4.19,4.19,0.00111555,0.00111555,-19.6,5.13316,4.0,-5.18,0.0,0.2785593,0.4660118,0.4961843,0.6286004,BCL-1.fasta +GC-780-781,AACCUUUUGGGCUAGCUACAACGAAUAUUUGUU,-7.27,2.97,2.81,0.00807551,0.0104692,-13.05,0.379868,6.0,-1.24,-12.18,0.2,1.72,0.722884,0.0613749,-14.1,0.957825,4.0,-7.17,-9.84,1.53,1.53,0.0835363,0.0835363,-12.9,0.427684,4.0,-5.44,-4.91,0.2147716,0.6286004,0.2891314,0.1638932,BCL-1.fasta +GC-797-798,UUUCUACUGGGCUAGCUACAACGAUUUAGUGAA,-9.04,2.81,2.98,0.0104692,0.00794554,-14.83,0.427033,6.0,-1.98,-11.31,0.2,2.37,0.722884,0.0213778,-13.88,0.924235,4.0,-6.95,-8.6,1.8,1.8,0.0539037,0.0539037,-12.2,0.216309,4.0,-3.84,-2.2700000000000014,0.1607461,0.1203405,0.1597732,0.2606664,BCL-1.fasta +GC-813-814,CUGACAAUGGGCUAGCUACAACGAAUAUUAUUU,-7.44,5.55,0.69,0.000122788,0.326428,-13.68,7.22874,4.0,-3.22,-13.25,0.2,0.65,0.722884,0.348316,-14.1,0.935257,4.0,-8.27,-12.16,0.55,0.55,0.409674,0.409674,-13.26,0.50533,4.0,-5.41,-5.81,0.1729574,0.3767207,0.06321846,0.1775528,BCL-1.fasta +GC-842-843,AGCCUGCAGGGCUAGCUACAACGAUUUGUUUCA,-9.15,6.54,6.51,2.46346e-05,2.58634e-05,-22.2,1.9473,4.0,-2.3,-9.15,6.54,6.51,2.46346e-05,2.58634e-05,-22.2,1.83071,4.0,-2.3,-4.34,1.08,1.08,0.173369,0.173369,-6.5,0.735339,2.0,-0.16,0.0,0.1910896,0.2512491,0.08731414,0.06012327,BCL-1.fasta +GC-845-846,AACAGCCUGGGCUAGCUACAACGAAGCUUUGUU,-11.25,5.82,4.53,7.92317e-05,0.000642548,-21.6,27.9072,6.0,-4.62,-11.25,5.82,4.53,7.92317e-05,0.000642548,-21.6,1.27557,6.0,-4.62,-12.4,2.2,2.2,0.028168,0.028168,-16.8,0.585591,6.0,-4.37,0.0,0.1205452,0.1910896,0.06012327,0.06016581,BCL-1.fasta +GC-849-850,CUUAAACAGGGCUAGCUACAACGACUGCAGCUU,-10.04,5.78,5.68,8.45444e-05,9.94376e-05,-21.5,2578.46,3.0,-1.01,-10.04,5.78,5.68,8.45444e-05,9.94376e-05,-21.5,4.94022,3.0,-1.01,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.08620129,0.1205452,0.06016581,0.2473704,BCL-1.fasta +GC-97-98,CUGCGACAGGGCUAGCUACAACGAUUAUAAUGG,-13.25,5.82,2.12,7.92317e-05,0.0320722,-21.19,0.937864,7.0,-4.81,-13.25,5.82,2.12,7.92317e-05,0.0320722,-21.19,0.816363,7.0,-4.81,-11.18,2.11,2.11,0.0325968,0.0325968,-15.4,2.99755,4.0,-3.69,0.0,0.4501444,0.1935058,0.07464232,0.3256034,BCL-1.fasta +GU-100-101,CCUCUGCGAGGCUAGCUACAACGAAGCUUAUAA,-13.21,5.12,2.91,0.000246694,0.00890122,-21.24,12.4289,5.0,-4.63,-13.21,5.12,2.91,0.000246694,0.00890122,-21.24,12.0209,5.0,-4.63,-1.9,2.26,2.26,0.025555,0.025555,-6.42,0.265716,2.0,-0.66,0.0,0.07464232,0.21256,0.1950831,0.3828758,BCL-1.fasta +GU-11-12,GAAAAGUAAGGCUAGCUACAACGAGGGGGCCAA,-11.64,5.85,5.92,7.54673e-05,6.73648e-05,-23.41,0.231806,9.0,-6.6,-11.64,5.85,5.92,7.54673e-05,6.73648e-05,-23.41,0.231481,9.0,-6.6,0.0,999999.0,999999.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.2201101,0.8424132,0.3285937,0.510089,BCL-1.fasta 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