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Fixed typos
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run.py

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -51,7 +51,7 @@ def run(command, env={}, ignore_errors=False):
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default="average")
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parser.add_argument('--license_key', help='FreeSurfer license key - letters and numbers after "*" in the email you received after registration. To register (for free) visit https://surfer.nmr.mgh.harvard.edu/registration.html',
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required=True)
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parser.add_argument('--acqusition_label', help='If the dataset contains multiple T1 weighted images from different acqusitions which one should be used? Corresponds to "acq-<acqusition_label>"')
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parser.add_argument('--acquisition_label', help='If the dataset contains multiple T1 weighted images from different acquisitions which one should be used? Corresponds to "acq-<acquisition_label>"')
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parser.add_argument('-v', '--version', action='version',
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version='BIDS-App example version {}'.format(__version__))
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@@ -85,8 +85,8 @@ def run(command, env={}, ignore_errors=False):
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session_dirs = glob(os.path.join(args.bids_dir,"sub-%s"%subject_label,"ses-*"))
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sessions = [os.path.split(dr)[-1].split("-")[-1] for dr in session_dirs]
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timepoints = []
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if args.acqusition_label:
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acq_tpl = "*acq-%s*"%args.acqusition_label
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if args.acquisition_label:
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acq_tpl = "*acq-%s*"%args.acquisition_label
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else:
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acq_tpl = "*"
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if len(sessions) > 1:

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