[DATALAD RUNCMD] ./.recreate_hierarchy

=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./.recreate_hierarchy",
 "exit": 0,
 "extra_inputs": [],
 "inputs": [],
 "outputs": [],
 "pwd": "proj-nipoppy"
}
^^^ Do not change lines above ^^^

Author: yarikoptic

proj-nipoppy/CHANGES

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+0.0.1 2024-06-20
+
+  -  Started to work on this support of the DatasetType project
+

proj-nipoppy/README.md

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+This is an example of an entire project/study level BIDS dataset.
+Built taking a hierarchy depicted on
+https://github.com/neurodatascience/nipoppy?tab=readme-ov-file#nipoppy
+and turning it into a valid BIDS layout.
+
+Some files (e.g. bagel.csv) are specific to nipoppy etc projects, but since
+located under folders where bids layout is not enforced -- should be just fine. 
+
+Some outstanding issues with validator(s) which were ran into while trying to
+get "proper" validation working using deno bids-validator (mark when solved)
+
+- [ ] https://github.com/bids-standard/bids-validator/issues/2007
+

proj-nipoppy/code/global_config.json

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+{}

proj-nipoppy/dataset_description.json

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+{
+    "Name": "Example how nipoppy dataset could be presented as project-type BIDS dataset",
+	"Description": "Demonstration for the https://github.com/bids-standard/bids-specification/pull/1861",
+    "BIDSVersion": "1.10.0",
+    "DatasetType": "project",
+    "Authors": [
+        "Yaroslav O. Halchenko", "Samuel Nastase"
+    ]
+}

proj-nipoppy/derivatives/bagel.csv

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+bids_id,participant_id,session,has_mri_data,pipeline_name,pipeline_version,pipeline_starttime,pipeline_complete
+sub-MNI001,MNI001,1,TRUE,freesurfer,6.0.1,2022-05-24 13:43,SUCCESS
+sub-MNI001,MNI001,2,TRUE,freesurfer,6.0.1,2022-05-24 13:46,SUCCESS
+sub-MNI001,MNI001,3,TRUE,freesurfer,6.0.1,UNAVAILABLE,INCOMPLETE