fix(genetics_ukbb): Update BatchID levels

Author: effigies

genetics_ukbb/participants.json

@@ -1,69 +1,73 @@
-{
-    "age": {
-        "LongName": "age",
-        "Description": "age of the participant",
-        "Units": "month"
-    },
-    "sex": {
-        "LongName": "sex",
-        "Description": "sex of the participant",
-        "Levels": {
-            "M": "male",
-            "F": "female"
-        }
-    },
-    "group": {
-        "LongName": "group",
-        "Description": "classification of participant based on study desease status",
-        "Levels": {
-            "patient": "patient",
-            "control": "control"
-        }
-    },
-    "genetic_id": {
-        "LongName": "genetic_id",
-        "Description": "Uniq sample ID per genotyped sample in genetic database"
-      },
-    "IDH": {
-        "LongName": "isocitrate dehydrogenase gene",
-        "Description": "mutation present or abscent",
-        "Levels": {
-            "yes": "present",
-            "no": "abscent"
-        }      },
-    "BatchID": {
-        "LongName": "BatchID",
-        "Description": "SNP array genotyping uniq batch ID per group of subjects",
-        "Levels": {
-            "b001": "Batch sequence number 1",
-            "b002": "Batch sequence number 2"
-        }
-      },
-      "VariationSetType": {
-            "LongName": "VariationSetType",
-            "Description": "Availability of SNV and/or CNV information",
-            "Levels": {
-                "SNV": "Single-nucleotide variants",
-                "CNV": "Copy-Number Variants",
-                "SNV/CNV": "Single-nucleotide variants/Copy-Number Variants"
-            }
-        },
-      "Assembly": {
-              "LongName": "Assembly",
-              "Description": "Reference genome from which the sample variations were computed",
-              "Levels": {
-                  "hg19": "Human genome version 19 equivalent to GRCh37 (Genome Reference consorcium of human build 37)",
-                  "hg38": "Human genome version 38 equivalent to GRCh38 (Genome Reference consorcium of human build 38)",
-                  "hg19/hg38": "Genome used to compute respectively the variations"
-              }
-          },
-      "GeneticDataType": {
-              "LongName": "GeneticDataType",
-              "Description": "Raw genetic data type submited for the dataset",
-              "Levels": {
-                  "WES": "Whole Exome Sequencing data (compressed FastQ or binary data format such as BAM or CRAM )",
-                  "SNP_intensity": "SNP array intensity data (text formated data type known as Illumina Final Report data)",
-                  "WES/SNP_intensity": "Both WES or SNP array data are available"
-              }
-        }
-  }
+{
+  "age": {
+    "LongName": "age",
+    "Description": "age of the participant",
+    "Units": "month"
+  },
+  "sex": {
+    "LongName": "sex",
+    "Description": "sex of the participant",
+    "Levels": {
+      "M": "male",
+      "F": "female"
+    }
+  },
+  "group": {
+    "LongName": "group",
+    "Description": "classification of participant based on study desease status",
+    "Levels": {
+      "patient": "patient",
+      "control": "control"
+    }
+  },
+  "genetic_id": {
+    "LongName": "genetic_id",
+    "Description": "Uniq sample ID per genotyped sample in genetic database"
+  },
+  "IDH": {
+    "LongName": "isocitrate dehydrogenase gene",
+    "Description": "mutation present or abscent",
+    "Levels": {
+      "yes": "present",
+      "no": "abscent"
+    }
+  },
+  "BatchID": {
+    "LongName": "BatchID",
+    "Description": "SNP array genotyping uniq batch ID per group of subjects",
+    "Levels": {
+      "b001": "Batch sequence number 1",
+      "b002": "Batch sequence number 2",
+      "b003": "Batch sequence number 3",
+      "b004": "Batch sequence number 4",
+      "b005": "Batch sequence number 5"
+    }
+  },
+  "VariationSetType": {
+    "LongName": "VariationSetType",
+    "Description": "Availability of SNV and/or CNV information",
+    "Levels": {
+      "SNV": "Single-nucleotide variants",
+      "CNV": "Copy-Number Variants",
+      "SNV/CNV": "Single-nucleotide variants/Copy-Number Variants"
+    }
+  },
+  "Assembly": {
+    "LongName": "Assembly",
+    "Description": "Reference genome from which the sample variations were computed",
+    "Levels": {
+      "hg19": "Human genome version 19 equivalent to GRCh37 (Genome Reference consorcium of human build 37)",
+      "hg38": "Human genome version 38 equivalent to GRCh38 (Genome Reference consorcium of human build 38)",
+      "hg19/hg38": "Genome used to compute respectively the variations"
+    }
+  },
+  "GeneticDataType": {
+    "LongName": "GeneticDataType",
+    "Description": "Raw genetic data type submited for the dataset",
+    "Levels": {
+      "WES": "Whole Exome Sequencing data (compressed FastQ or binary data format such as BAM or CRAM )",
+      "SNP_intensity": "SNP array intensity data (text formated data type known as Illumina Final Report data)",
+      "WES/SNP_intensity": "Both WES or SNP array data are available"
+    }
+  }
+}