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extract institution information
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src/modality-specific-files/magnetic-resonance-spectroscopy.md

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@@ -50,11 +50,13 @@ The `*.sdat` file contains either each coil-combined transient stored separately
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or all transients summed into a signal average.
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The `*.spar` file is a plaintext file describing acquisition parameters.
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It is also possible to export raw data as `*.data`/`*.list` or DICOM files.
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Siemens scanners allow data export in four formats: i) a proprietary DICOM-structured file known as IMA (`*.ima`);
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ii) a conventional DICOM MR Spectroscopy Storage format (`*.dcm`); iii) RDA (`*.rda`),
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a proprietary file format with a text-formatted header followed by the binary data points;
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and iv) TWIX (`*.dat`), a proprietary file format designed for storing unreconstructed, unprocessed MRS data
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from each individual coil element.
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Siemens scanners allow data export in four formats:
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1. a proprietary DICOM-structured file known as IMA (`*.ima`);
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1. a conventional DICOM MR Spectroscopy Storage format (`*.dcm`);
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1. RDA (`*.rda`), a proprietary file format with a text-formatted header followed by the binary data points;
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1. TWIX (`*.dat`), a proprietary file format designed for storing unreconstructed, unprocessed MRS data from each individual coil element.
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The IMA, DICOM MRS, and RDA formats are typically used to export reconstructed and processed data;
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however, the sequence designer may choose to also allow the export of un-averaged transients
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or data from individual coil elements.
@@ -153,6 +155,18 @@ A guide for using macros can be found at
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-->
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{{ MACROS___make_sidecar_table("mrs.MRSScannerHardware") }}
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#### Institution information
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<!-- This block generates a metadata table.
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These tables are defined in
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src/schema/rules/sidecars
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The definitions of the fields specified in these tables may be found in
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src/schema/objects/metadata.yaml
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A guide for using macros can be found at
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https://github.com/bids-standard/bids-specification/blob/master/macros_doc.md
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-->
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{{ MACROS___make_sidecar_table("mrs.MRSInstitutionInformation") }}
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#### Sequence specifics
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<!-- This block generates a metadata table.

src/schema/rules/sidecars/mrs.yaml

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---
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# MRS Common metadata fields
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MRSScannerHardware:
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MRSInstitutionInformation:
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selectors:
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- modality == "mrs"
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- match(extension, "^\.nii(\.gz)?$")
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fields:
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InstitutionName: recommended
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InstitutionAddress: recommended
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InstitutionName: recommended
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InstitutionalDepartmentName: recommended
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MRSScannerHardware:
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selectors:
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- modality == "mrs"
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- match(extension, "^\.nii(\.gz)?$")
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fields:
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Manufacturer: recommended
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ManufacturersModelName: recommended
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DeviceSerialNumber: recommended

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