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[ENH] Update references and abbreviations in documentation (#690)
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docs/index.md

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@@ -105,15 +105,19 @@ By using this standard you will benefit in the following ways:
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## Further information
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- Good introductions to the BIDS standard can be found in the initial
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[paper published in Nature Scientific Data](https://www.nature.com/articles/sdata201644),
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[paper published in Scientific Data](https://www.nature.com/articles/sdata201644),
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as well as in the follow up papers on specific modalities:
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[MEG](https://www.nature.com/articles/sdata2018110),
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[EEG](https://www.nature.com/articles/s41597-019-0104-8),
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[iEEG](https://www.nature.com/articles/s41597-019-0105-7),
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[genetics](https://doi.org/10.1093/gigascience/giaa104),
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[PET](https://doi.org/10.1038/s41597-022-01164-1),
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[microscopy](https://doi.org/10.3389/fnins.2022.871228),
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and [qMRI](https://doi.org/10.1038/s41597-022-01571-4).
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[qMRI](https://doi.org/10.1038/s41597-022-01571-4),
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[ASL](https://www.nature.com/articles/s41597-022-01615-9),
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[NIRS](https://www.nature.com/articles/s41597-024-04136-9),
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[motion](https://www.nature.com/articles/s41597-024-03559-8),
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and [MRS](https://www.nature.com/articles/s41597-025-05543-2).
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- Look through some of the community's [presentations on BIDS](https://osf.io/yn93h/).
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includes/abbreviations.md

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*[BEP]: BIDS Extension Proposal
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*[BEPs]: BIDS Extension Proposals
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*[BIDS]: Brain Imaging Data Structure
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*[DOI]: Digital Object Identifiers
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*[DOI]: Digital Object Identifier
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*[EEG]: Electroencephalography
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*[iEEG]: Intracranial Electroencephalography
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*[JSON]: JavaScript Object Notation
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*[MEG]: Magnetoencephalography
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*[MRI]: Magnetic Resonance Imaging
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*[NIRS]: Near-InfraRed Spectroscopy
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*[MRS]: Magnetic Resonance Spectroscopy
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*[NIRS]: Near-Infrared Spectroscopy
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*[PET]: Positron Imaging Tomography
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*[TSV]: Tab Separated Values
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*[qMRI]: Quantitative Magnetic Resonance Imaging
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*[URI]: Uniform Resource Identifier
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*[URL]: Uniform Resource Locator

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