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updating BIDS impact page (#550)
Co-authored-by: Remi Gau <[email protected]> Co-authored-by: christinerogers <[email protected]>
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docs/impact/index.md

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# Impact
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# BIDS Impact
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The Brain Imaging Data Structure (BIDS) is an open global community driving the
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standardization of neuroscience data across a broad and growing range of modalities
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and health research disciplines. First released in June 2016, it is supported by a
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worldwide research network and endorsed by organizations like the International
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Neuroinformatics Coordinating Facility ([INCF](https://www.incf.org/)).
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BIDS encompasses:
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- Over 40 domain-specific and modality-specific technical specifications across
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scientific and technical domains.
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- 100+ sample data models for BIDS specifications in
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[bids-examples](https://github.com/bids-standard/bids-examples). Read more about
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the [BIDS specification](https://bids-specification.readthedocs.io/en/stable/).
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- 2000 open datasets across repositories including
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[OpenNeuro](https://www.openneuro.org). Read more about [BIDS Datasets](/docs/datasets/index.md).
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- Open software conversion and analytics tools, and global infrastructure for
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collaborating on emerging standards in neuroscience
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[Poldrack, et al, 2024](https://direct.mit.edu/imag/article/doi/10.1162/imag_a_00103/119672/The-past-present-and-future-of-the-brain-imaging).
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- ~30,000 annual website visits from a very large community of neuroscience researchers
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actively consulting the BIDS specifications (April 2023-24).
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- Over 300 BIDS contributors currently supporting and maintaining BIDS community
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resources and tools.
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- Open working processes through online collaborative tools including GitHub,
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GitHub Pages, ReadTheDocs, Google Docs, and OSF.
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The BIDS core steering and maintainers groups work with the community to optimize open
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adherence to FAIR principles (Findable, Accessible, Interoperable, and Reusable,
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[Wilkinson, et al, 2016](https://www.nature.com/articles/sdata201618)) and to actively
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lower barriers to adoption.
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This document intends to convey how the BIDS Steering and Maintainers Group can
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support your proposed BIDS grant. In an effort to express the impact of BIDS in
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the brain imaging community, we have shared several of our traffic metrics.
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## How the BIDS team can help you
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If you are in the process of putting together a grant, **please email/message
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the pillar lead** that is most closely associated with your proposed grant so we
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may help support this. Our organization is structured into 3 pillars: standard,
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tools, and collaboration.
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The respective leads are:
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- Stefan Appelhoff ([[email protected]](mailto:[email protected])),
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- Chris Markiewicz ([[email protected]](mailto:[email protected]))
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Our range of support covers activities such as: meeting with the Steering and
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Maintainers Groups to assisting with connecting you with other BIDS grant
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writers or related initiatives to receiving a letter of support from the
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Steering Group.
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Regarding **requesting a letter of support** - please submit a drafted letter of
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support to the collaboration lead (???) so we may review internally.
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Please include how you plan on giving back to the BIDS community. The primary
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mechanism is to support a member of your team to become a BIDS Maintainer.
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Letters of support are approved by the Steering Group. This process may take 2-4
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weeks to complete.
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We kindly ask you to please **share your grant online** - successful or not.
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This will signal to the rest of the community what avenues we have pursued and
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what our fellow colleagues are planning on doing next. These can be grants that
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directly extend our support into a new domain, grants that help BIDS (for example
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OpenNeuro), or unsuccessful grant applications.
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For example, please find our [NIH-R24 Brain Initiative BIDS-Derivatives grant](https://osf.io/c3dgx/).
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A listing of the previous grants can be found [here](../collaboration/acknowledgments.md)
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## dashboards
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## Measuring BIDS Impact
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### Datasets
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Over the years, the number of shared datasets available to the public has
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greatly increased. At its heart, adoption of the BIDS standard across datasets
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aids in the sharing of data and collaboration of research through the standardization
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of descriptive files names and the organization of data. BIDS organized datasets are
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available through public repositories such as [Openneuro.org](https://openneuro.org/)
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and the number of publicly available BIDS datasets continues to grow every year.
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### Citation Count
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BIDS references are centralized in a [zotero group](https://www.zotero.org/groups/5111637/bids)
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You can also find them [in the specification](https://bids-specification.readthedocs.io/en/latest/introduction.html#citing-bids)
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As the adoption of the BIDS standard across neuroimaging datasets has grown, so have
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citations for work that uses BIDS data and BIDS apps. To aid in searching for publications
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relevant to the BIDS standard, we have included some examples of BIDS references that are
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centralized in a [zotero group](https://www.zotero.org/groups/5111637/bids)
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--8<-- "tmp/citation_per_year.html"
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### GitHub stars
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GitHub stars quantify the number of users that have marked a repository as a favorite and have
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chosen to follow the changes made to that repository. Below is a table of GitHub repos that are
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associated with the BIDS standard and their star count. By tracking repo interest via GitHub stars,
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we can quantify which BIDS-associated tools are of the highest interest to the research community.
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| repository | stars |
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| ----------------- | ------------------------------------------------------------------------------------------ |
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| fmriprep | ![GitHub Repo stars](https://img.shields.io/github/stars/nipreps/fmriprep) |
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| mriqc | ![GitHub Repo stars](https://img.shields.io/github/stars/nipreps/mriqc) |
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| bids-standard | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/bids-specification) |
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| bids-starter-kit | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/bids-starter-kit) |
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| bids-validator | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/bids-validator) |
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| pybids | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/pybids) |
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| qsiprep | ![GitHub Repo stars](https://img.shields.io/github/stars/PennLINC/qsiprep) |
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| bids-matlab | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/bids-matlab) |
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| statistical model | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/stats-models) |
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| fmriprep | ![GitHub Repo stars](https://img.shields.io/github/stars/nipreps/fmriprep) |
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| mriqc | ![GitHub Repo stars](https://img.shields.io/github/stars/nipreps/mriqc) |
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| qsiprep | ![GitHub Repo stars](https://img.shields.io/github/stars/PennLINC/qsiprep) |
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| bids-validator | ![GitHub Repo stars](https://img.shields.io/github/stars/bids-standard/bids-validator) |
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### Downloads
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| bids-schema | ![PyPI - Downloads](https://img.shields.io/pypi/dm/bidsschematools) |
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| statistical model | ![PyPI - Downloads](https://img.shields.io/pypi/dm/bsmschema) |
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For the number of docker pulls of the BIDS apps, please check the
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For the number of docker pulls of specific BIDS apps, please check the
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[BIDS app dashboard](https://bids-website.readthedocs.io/en/latest/tools/bids-apps.html).
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### Contributors
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We update the contributor appendix every specification release. As of July 2023,
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we have over 300 credited contributors.
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The table below provides a brief account of the number of contributors per repository. Estimated demographics and affiliations
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of contributors is also provided below.
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| repository | all-contributors | github |
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| ----------------- | --------------------------------------------------------------------------------------------------------------------------------- | ------------------------------------------------------------------------------------------------- |
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| bids-standard | ![GitHub contributors (via allcontributors.org)](https://img.shields.io/github/all-contributors/bids-standard/bids-specification) | ![GitHub Repo stars](https://img.shields.io/github/contributors/bids-standard/bids-specification) |
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| ---------- | ----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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| pybids | [![](https://img.shields.io/static/v1?label=Used%20by&message=596&color=informational&logo=slickpic)](https://github.com/bids-standard/pybids/network/dependents) |
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## Measuring BIDS Impact
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## BIDS History
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### Impact summary
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Since its origin, the BIDS standard has revolutionized the way in which neuroimaging
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research is done. The origin of the BIDS standard is commonly traced back to 2014,
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when a social media post ignited a deeper discussion about a new way of sharing
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data, that would ultimately lead to a set of standards that would improve scientific
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collaboration efforts.
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Since its origin, the BIDS has revolutionized the way in which neuroimaging
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research is done.
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Following this initial discussion (and on the shoulders of many many volunteer hours
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by maintainers and the community at large) the BIDS standard saw significant adoption
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in the neuroimaging research landscape and continues to expand every day. A more complete
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history and discussion about the future of the BIDS landscape can be found in this
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[recent publication](https://pmc.ncbi.nlm.nih.gov/articles/PMC10516110/).
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~??? users visiting the website, and ~??? users exploring the BIDS
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Specification, over the past ??? months.
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The BIDS standard continues to be adopted by a larger share of the community each year.
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We have seen a large and growing number of visitors to the BIDS website. A large number of
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BIDS users also continue to explore the BIDS Specification and contribute to the community every month.
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Currently, ???
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[reported](https://docs.google.com/spreadsheets/d/1aySjPpEGGQwFcOavkQdcvk2t2UMXt_zoTzWLWUmq20M/edit#gid=0)
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centers, institutes and databases around the world that have implemented BIDS as
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their organizational structure.
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We also document centers, institutes, and databases around the world that have implemented BIDS as
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their organizational structure. While the list continues to grow, an initial list of centers and the associated
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BIDS initiatives or database can be found
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[here](https://docs.google.com/spreadsheets/d/1aySjPpEGGQwFcOavkQdcvk2t2UMXt_zoTzWLWUmq20M/edit#gid=0).
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### Website and Specification traffic dashboards
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In order to measure the volume of traffic to our
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website and the
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In order to measure the volume of traffic to our website and the
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[ReadTheDocs rendering of the specification](https://bids-specification.readthedocs.io/en/stable/),
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we utilize Google Analytics.
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The default time period is set to the past 6 months. This can be changed by
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adjusting the time period in the upper left corner. Please feel free to use any
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of these figures in your grant! If there are additional statistics not currently
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conveyed, please reach out to (???).
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conveyed, please reach out to or the BIDS maintainers via a GitHub issue, or by email
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### BIDS usage
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### Neurostars
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We also track the interest and usage of the BIDS standard via discussions on Neurostars
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to help us estimate trends in usage. Below is a snapshot as of ??? (date).
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[BIDS email list](https://forms.gle/JFo2aEkYbKY4EbmE6) and 412 members on our
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[google group](https://groups.google.com/forum/#!forum/bids-discussion).
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## How the BIDS team can help you
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If you are in the process of putting together a grant, **please email/message
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the pillar lead** that is most closely associated with your proposed grant or the
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BIDS maintainers email ([[email protected]](mailto:[email protected]))
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so we may help support this. Our organization is structured into 3 pillars: standard,
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tools, and collaboration.
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Our range of support covers activities such as: meeting with the Steering and
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Maintainers Groups to assisting with connecting you with other BIDS grant
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writers or related initiatives to receiving a letter of support from the
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Steering Group.
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Regarding **requesting a letter of support** - please submit a drafted letter of
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support to the collaboration lead or the BIDS maintainers email
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([[email protected]](mailto:[email protected])) so we may review internally.
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Please include how you plan on giving back to the BIDS community. The primary
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mechanism is to support a member of your team to become a BIDS Maintainer.
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Letters of support are approved by the Steering Group. This process may take 2-4
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weeks to complete.
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We kindly ask you to please **share your grant online** - successful or not.
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This will signal to the rest of the community what avenues we have pursued and
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what our fellow colleagues are planning on doing next. These can be grants that
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directly extend our support into a new domain, grants that help BIDS (for example
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OpenNeuro), or unsuccessful grant applications.
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For example, please find our [NIH-R24 Brain Initiative BIDS-Derivatives grant](https://osf.io/c3dgx/).
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A listing of the previous grants can be found [here](../collaboration/acknowledgments.md)
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## Citing BIDS in your project
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You can find information on citing BIDS standards for specific modalities and
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citing BIDS in general
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[in the specification](https://bids-specification.readthedocs.io/en/latest/introduction.html#citing-bids)
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## Future steps: TODO
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