prompts.csv

id,tool_tested,prompt,expected answer
uniprot_location_pcnx3,UniProt,In which subcellular compartment is human PCNX3 expressed according to UniProt?,Membrane
uniprot_sequence_cxcl6,UniProt,What is the amino acid sequence of human CXCL6?,MSLPSSRAARVPGPSGSLCALLALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNPKTIGKLQVFPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKVIQKILDSGNKKN
string_interactions_synpo,STRING,"Which are the top 5 interacting proteins and their interaction scores for SYNPO in humans, according to STRING?","{'MAGI1': 0.994, 'ACTN4': 0.981, 'NPHS1': 0.966, 'CD2AP': 0.962, 'ACTB': 0.951}"
string_similarity_adam9_adamts9,STRING,What is the similarity bit score between ADAM9 and ADAMTS9 for humans?,95.1
kegg_pathways_canx,KEGG,Which KEGG pathways feature human Calnexin?,"'pathways': [ {'name': 'Protein processing in endoplasmic reticulum', 'id': 'hsa04141'}, {'name': 'Phagosome', 'id': 'hsa04145'}, {'name': 'Antigen processing and presentation', 'id': 'hsa04612'}, {'name': 'Thyroid hormone synthesis', 'id': 'hsa04918'}, {'name': 'Human T-cell leukemia virus 1 infection', 'id': 'hsa05166'}]"
ot_diseases_gatm,Open Targets,"Based on Open Targets, which specific diseases have been linked to GATM with high confidence?","'diseases': [{'name': 'Fanconi renotubular syndrome'},