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Replace FontAwesome with Bootstrap icons (#1864)
Closes #1216
1 parent 41f77cb commit 5eec556

27 files changed

Lines changed: 142 additions & 118 deletions

‎src/bioregistry/app/impl.py‎

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<div class="text-center">
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<a class="btn btn-outline-primary btn-sm mb-1" rel="me" href="https://{INTERNAL_MASTODON_SERVER}/@{INTERNAL_MASTODON_HANDLE}" title="{INTERNAL_MASTODON_HANDLE}"> @{INTERNAL_MASTODON}</a>
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<a class="btn btn-outline-primary btn-sm mb-1" href="{INTERNAL_REPOSITORY}"><i class="fa fa-brands fa-github"></i> Source Code</a>
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<a class="btn btn-outline-primary btn-sm mb-1" href="{INTERNAL_REPOSITORY}"><i class="bi bi-github"></i> Source Code</a>
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</div>
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""")
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BIOREGISTRY_HEADER_DEFAULT = dedent("""\
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<p>
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A Docker image is automatically built weekly following the
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<a href="{INTERNAL_REPOSITORY}/actions/workflows/update.yml">update workflow</a>
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on GitHub Actions and pushed to the <a href="https://hub.docker.com/r/{INTERNAL_DOCKERHUB_SLUG}"><i class="fab fa-docker"></i>
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{INTERNAL_DOCKERHUB_SLUG}</a> DockerHub repository. This image is built with the Python 3.9 alpine base image,
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on GitHub Actions and pushed to the <a href="https://hub.docker.com/r/{INTERNAL_DOCKERHUB_SLUG}">
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{INTERNAL_DOCKERHUB_SLUG}</a> DockerHub repository. This image is built with a Python alpine base image,
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which significantly reduces non-essential components. The final compressed image weights less than 40 MB of disk
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space and runs inside Docker with about 65 MB of memory at baseline. This could easily fit on a dedicated
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<a href="https://aws.amazon.com/ec2/instance-types/t4/">t4g.nano</a> instance on AWS that costs about

‎src/bioregistry/app/static/orcid.svg‎

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‎src/bioregistry/app/templates/base.html‎

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</style>
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{% endblock %}
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<script src="https://kit.fontawesome.com/4c86883252.js" crossorigin="anonymous"></script>
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<link rel="stylesheet" href="https://cdn.jsdelivr.net/npm/bootstrap-icons@1.13.1/font/bootstrap-icons.min.css">
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<title>{% block title %}{% endblock %}</title>
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<meta name="description" content="{{ config.METAREGISTRY_DESCRIPTION }}" />
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<link rel="icon" type="image/svg+xml" href="/static/logo.svg">
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<a class="dropdown-item" href="{{ url_for("metaregistry_ui.summary") }}">Summary</a>
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{% else %}
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<a class="dropdown-item" target="_blank" href="https://bioregistry.io/summary">
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Summary <i class="fa fa-external-link" aria-hidden="true"></i>
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Summary <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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{% endif %}
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY_PAGES }}/glossary/">
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Glossary <i class="fa fa-external-link" aria-hidden="true"></i>
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Glossary <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY_PAGES }}/datamodel/">
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Data Model <i class="fa fa-external-link" aria-hidden="true"></i>
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Data Model <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" href="{{ url_for("metaregistry_ui.schema") }}">JSON and RDF Schemata</a>
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{% if config.METAREGISTRY_FIRST_PARTY %}
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<div class="dropdown-divider"></div>
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<h6 class="dropdown-header">Maintenance</h6>
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<a class="dropdown-item" href="{{ url_for("metaregistry_ui.sustainability") }}">Deployment and Sustainability</a>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY_PAGES }}/health/">
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Health Report <i class="fa fa-external-link" aria-hidden="true"></i>
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Health Report <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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{% endif %}
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<div class="dropdown-divider"></div>
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<div class="dropdown-divider"></div>
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<h6 class="dropdown-header">Workshops</h6>
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<a class="dropdown-item" target="_blank" href="https://biopragmatics.github.io/workshops/wpci2021">
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WPCI 2021 <i class="fa fa-external-link" aria-hidden="true"></i>
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WPCI 2021 <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="https://biopragmatics.github.io/workshops/wpci2022">
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WPCI 2022 <i class="fa fa-external-link" aria-hidden="true"></i>
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WPCI 2022 <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="https://biopragmatics.github.io/workshops/wpci2023">
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WPCI 2023 <i class="fa fa-external-link" aria-hidden="true"></i>
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WPCI 2023 <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="https://biopragmatics.github.io/workshops/biocuration2025">
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Biocuration 2025 <i class="fa fa-external-link" aria-hidden="true"></i>
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Biocuration 2025 <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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</div>
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</li>
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<div class="dropdown-menu" aria-labelledby="navbarDropdown">
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<h6 class="dropdown-header">Project Info</h6>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY }}/blob/main/docs/CONTRIBUTING.md">
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Contribution Guidelines <i class="fa fa-external-link" aria-hidden="true"></i>
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Contribution Guidelines <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY }}/blob/main/docs/CODE_OF_CONDUCT.md">
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Code of Conduct <i class="fa fa-external-link" aria-hidden="true"></i>
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Code of Conduct <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY }}/blob/main/docs/GOVERNANCE.md">
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Project Governance <i class="fa fa-external-link" aria-hidden="true"></i>
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Project Governance <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<div class="dropdown-divider"></div>
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<h6 class="dropdown-header">Getting Started</h6>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY }}/issues/new?labels=New%2CPrefix&template=new-prefix.yml&title=Add+prefix+%5BX%5D">
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Request a Prefix <i class="fa fa-external-link" aria-hidden="true"></i>
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Request a Prefix <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<a class="dropdown-item" target="_blank" href="{{ config.METAREGISTRY_REPOSITORY_PAGES }}/curation/">
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Good First Contributions <i class="fa fa-external-link" aria-hidden="true"></i>
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Good First Contributions <i class="bi bi-link-45deg" aria-hidden="true"></i>
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</a>
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<!--<div class="dropdown-divider"></div>-->
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</div>

‎src/bioregistry/app/templates/collection.html‎

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<div class="card-header">
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<div class="row align-items-center">
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<div class="col-8">
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<h5 style="margin: 0"><a href="{{ url_for("metaregistry_ui.collections") }}">Collections</a>
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<i class="fas fa-angle-right"></i> {{ entry.name }}</h5>
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<h5 style="margin: 0"><a href="{{ url_for('metaregistry_ui.collections') }}">Collections</a>
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<i class="bi bi-chevron-right"></i> {{ entry.name }}</h5>
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</div>
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<div class="col-4 text-right">
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<div class="d-flex flex-row-reverse">
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<div class="dropdown-menu" aria-labelledby="dropdownMenuButton">
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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_collection", identifier=identifier) }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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href="{{ fastapi_url_for('get_collection', identifier=identifier) }}?format={{ key }}">
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>
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<dt>Maintainers</dt>
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{%- for maintainer in entry.maintainers %}
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<dd style="margin-bottom: 0;">
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<a href="{{ url_for("metaregistry_ui.contributor", orcid=maintainer.orcid) }}">
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{{ maintainer.name }}
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<i class="fab fa-orcid"></i>
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<a href="{{ url_for('metaregistry_ui.contributor', orcid=maintainer.orcid) }}">
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{{ maintainer.name }} {{ utils.orcid_img() }}
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</a>
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</dd>
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{%- endfor %}
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{%- endif %}
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<dt>Contributors</dt>
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{%- for author in entry.authors %}
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<dd style="margin-bottom: 0;">
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<a href="{{ url_for("metaregistry_ui.contributor", orcid=author.orcid) }}">
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{{ author.name }}
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<i class="fab fa-orcid"></i>
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<a href="{{ url_for('metaregistry_ui.contributor', orcid=author.orcid) }}">
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{{ author.name }} {{ utils.orcid_img() }}
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</a>
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</dd>
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{%- endfor %}
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<a href="{{ organization.link }}">
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{{ organization.name }}
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{%- if organization.ror -%}
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<img style="max-height: 1em; margin-left: 0.3em" src="/static/ror.svg" alt="ror logo" />
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{{ utils.ror_img() }}
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{%- endif %}
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</a>
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</dd>
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<span class="dropdown-menu">
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{%- for metaprefix, target_registry in manager.metaregistry.items() %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_collection_mapped", identifier=entry.identifier, metaprefix=metaprefix) }}">
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href="{{ fastapi_url_for('get_collection_mapped', identifier=entry.identifier, metaprefix=metaprefix) }}">
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{{ target_registry.get_short_name() }}
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</a>
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{%- endfor %}
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<code>{{ prefix }}</code>
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</td>
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<td>
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<a href="{{ url_for("metaregistry_ui.resource", prefix=prefix) }}">
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<a href="{{ url_for('metaregistry_ui.resource', prefix=prefix) }}">
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{{ resources[prefix].get_name() }} {{ utils.render_resource_warnings(resources[prefix]) }}
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</a>
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</td>
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<code>{{ indirect_resource.prefix }}</code>
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</td>
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<td>
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<a href="{{ url_for("metaregistry_ui.resource", prefix=prefix) }}">
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<a href="{{ url_for('metaregistry_ui.resource', prefix=prefix) }}">
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{{ indirect_resource.get_name() }} {{ utils.render_resource_warnings(indirect_resource) }}
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</a>
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</td>

‎src/bioregistry/app/templates/collections.html‎

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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_collections") }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>

‎src/bioregistry/app/templates/context.html‎

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<div class="row align-items-center">
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<div class="col-8">
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<h5 style="margin: 0"><a href="{{ url_for("metaregistry_ui.contexts") }}">Contexts</a>
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<i class="fas fa-angle-right"></i> {{ entry.name }}</h5>
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<i class="bi bi-chevron-right"></i> {{ entry.name }}</h5>
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</div>
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<div class="col-4 text-right">
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<div class="dropdown">
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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_context", identifier=identifier) }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>
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<dd>
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<a class="badge badge-pill badge-success"
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href="{{ config.METAREGISTRY_REPOSITORY }}/blob/main/exports/contexts/{{ identifier }}.context.jsonld">
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Download JSON LD <i class="fas fa-download"></i>
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Download JSON LD <i class="bi bi-download"></i>
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</a>
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<a class="badge badge-pill badge-success"
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href="{{ config.METAREGISTRY_REPOSITORY }}/blob/main/exports/contexts/{{ identifier }}.context.ttl">
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Download SHACL <i class="fas fa-download"></i>
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Download SHACL <i class="bi bi-download"></i>
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</a>
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</dd>
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<dt>Maintainers</dt>
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{% for author in entry.maintainers %}
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<li>
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<a href="{{ url_for("metaregistry_ui.contributor", orcid=author.orcid) }}">
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{{ author.name }}
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<i class="fab fa-orcid"></i>
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{{ author.name }} {{ utils.orcid_img() }}
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</a>
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</li>
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{% endfor %}

‎src/bioregistry/app/templates/contexts.html‎

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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_contexts") }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>

‎src/bioregistry/app/templates/contributor.html‎

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<div class="col-8">
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<h5 style="margin: 0">
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<a href="{{ url_for('metaregistry_ui.contributors') }}">Contributors</a>
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<i class="fas fa-angle-right"></i> {{ contributor.name }}
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<i class="bi bi-chevron-right"></i> {{ contributor.name }}
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</h5>
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</div>
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<div class="col-4 text-right">
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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for('get_contributor', orcid=contributor.orcid) }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>
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<dt>ORCID</dt>
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<dd>
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<a href="https://orcid.org/{{ contributor.orcid }}">
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{{ contributor.orcid }} <i class="fab fa-orcid"></i>
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{{ contributor.orcid }} {{ utils.orcid_img() }}
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</a>
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</dd>
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{#

‎src/bioregistry/app/templates/contributors.html‎

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{% for label, key in formats %}
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<a class="dropdown-item"
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href="{{ fastapi_url_for("get_contributors") }}?format={{ key }}">
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{{ label }} <i class="fas fa-download"></i>
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{{ label }} <i class="bi bi-download"></i>
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</a>
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{% endfor %}
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</div>

‎src/bioregistry/app/templates/highlights/relations.html‎

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{% for k, v in ddd.items() %}
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<dt class="col-3" style="text-align: right">{{ k }}
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{% if k not in manager.registry %}
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<i class="far fa-question-circle" style="color: red;"></i>
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<i class="bi bi-question-circle" style="color: red;"></i>
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{% endif %}
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</dt>
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<dd class="col-9">

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