Merge branch integrate-new-solver into develop

Author: stfnp

docs/theory-manual/.gitignore

@@ -1,9 +1,9 @@
 # Latex
 /build
 /_minted-document
-/*.toc
-/*.gz
-/*.pdf
-/*.out
-/*.log
-/*.aux
+*.toc
+*.gz
+*.pdf
+*.out
+*.log
+*.aux