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Merge branch 'lib_gen_20251115' of https://github.com/puja-trivedi/models into lib_gen_20251115
2 parents 9fd3157 + fc65605 commit 26d27b9

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erdiagram-autogen/library_generation.md

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@@ -31,6 +31,7 @@ ProvEntity {
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}
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DissectionRoiPolygon {
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label_type name
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uriorcurieList xref
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string id
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iri_type iri
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uriorcurieList category
@@ -198,14 +199,14 @@ DissectionRoiDelineation {
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}
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LibraryPool {
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label_type name
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uriorcurieList xref
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string local_tube_id
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string id
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iri_type iri
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stringList type
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -215,13 +216,13 @@ LibraryPool {
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}
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LibraryAliquot {
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label_type name
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uriorcurieList xref
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string id
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iri_type iri
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stringList type
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -231,6 +232,7 @@ LibraryAliquot {
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}
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Library {
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label_type name
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uriorcurieList xref
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integer average_size_bp
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float concentration_nm
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library_prep_pass_fail library_result
@@ -243,7 +245,6 @@ Library {
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -253,6 +254,7 @@ Library {
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}
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AmplifiedCdna {
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label_type name
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uriorcurieList xref
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float amplified_cDNA_quantity_ng
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amplified_cdna_rna_amplification_pass_fail amplified_cDNA_result
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float percent_cdna_longer_than_400bp
@@ -262,7 +264,6 @@ AmplifiedCdna {
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -272,14 +273,14 @@ AmplifiedCdna {
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}
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BarcodedCellSample {
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label_type name
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uriorcurieList xref
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integer number_of_expected_cells
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string id
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iri_type iri
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stringList type
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -289,6 +290,7 @@ BarcodedCellSample {
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}
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EnrichedCellSample {
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label_type name
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uriorcurieList xref
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string enrichment_population
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string enriched_cell_oligo_name
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string histone_modification_marker
@@ -298,7 +300,6 @@ EnrichedCellSample {
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -308,6 +309,7 @@ EnrichedCellSample {
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}
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DissociatedCellSample {
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label_type name
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uriorcurieList xref
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dissociated_cell_sample_cell_prep_type cell_prep_type
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dissociated_cell_sample_cell_label_barcode dissociated_cell_oligo_name
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string id
@@ -316,7 +318,6 @@ DissociatedCellSample {
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -326,14 +327,14 @@ DissociatedCellSample {
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}
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TissueSample {
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label_type name
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uriorcurieList xref
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stringList structure
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string id
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iri_type iri
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stringList type
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -343,13 +344,13 @@ TissueSample {
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}
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BrainSlab {
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label_type name
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uriorcurieList xref
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string id
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iri_type iri
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stringList type
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content
@@ -359,6 +360,7 @@ BrainSlab {
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}
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Donor {
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label_type name
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uriorcurieList xref
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sex biological_sex
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string age_at_death_description
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age_at_death_reference_point age_at_death_reference_point
@@ -372,7 +374,6 @@ Donor {
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narrative_text description
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boolean deprecated
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stringList provided_by
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uriorcurieList xref
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label_type full_name
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label_typeList synonym
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float information_content

json-schema-autogen/library_generation.json

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@@ -2093,6 +2093,16 @@
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"string",
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"null"
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]
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},
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"xref": {
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"description": "A database cross reference or alternative identifier for a NamedThing or edge between two NamedThings. This property should point to a database record or webpage that supports the existence of the edge, or gives more detail about the edge. This property can be used on a node or edge to provide multiple URIs or CURIE cross references.",
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"items": {
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"type": "string"
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},
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"type": [
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"array",
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"null"
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]
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}
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},
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"required": [

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