removing commented parts from bican_biolink

Author: djarecka

linkml-schema/bican_biolink.yaml

@@ -532,274 +532,6 @@ types:
     typeof: string
     base: str
     uri: xsd:string
-  # string:
-  #   name: string
-  #   definition_uri: https://w3id.org/linkml/String
-  #   description: A character string
-  #   notes:
-  #   - In RDF serializations, a slot with range of string is treated as a literal or
-  #     type xsd:string.   If you are authoring schemas in LinkML YAML, the type is
-  #     referenced with the lower case "string".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Text
-  #   base: str
-  #   uri: xsd:string
-  # integer:
-  #   name: integer
-  #   definition_uri: https://w3id.org/linkml/Integer
-  #   description: An integer
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "integer".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Integer
-  #   base: int
-  #   uri: xsd:integer
-  # boolean:
-  #   name: boolean
-  #   definition_uri: https://w3id.org/linkml/Boolean
-  #   description: A binary (true or false) value
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "boolean".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Boolean
-  #   base: Bool
-  #   uri: xsd:boolean
-  #   repr: bool
-  # float:
-  #   name: float
-  #   definition_uri: https://w3id.org/linkml/Float
-  #   description: A real number that conforms to the xsd:float specification
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "float".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Float
-  #   base: float
-  #   uri: xsd:float
-  # double:
-  #   name: double
-  #   definition_uri: https://w3id.org/linkml/Double
-  #   description: A real number that conforms to the xsd:double specification
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "double".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   close_mappings:
-  #   - schema:Float
-  #   base: float
-  #   uri: xsd:double
-  # decimal:
-  #   name: decimal
-  #   definition_uri: https://w3id.org/linkml/Decimal
-  #   description: A real number with arbitrary precision that conforms to the xsd:decimal
-  #     specification
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "decimal".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   broad_mappings:
-  #   - schema:Number
-  #   base: Decimal
-  #   uri: xsd:decimal
-  # time:
-  #   name: time
-  #   definition_uri: https://w3id.org/linkml/Time
-  #   description: A time object represents a (local) time of day, independent of any
-  #     particular day
-  #   notes:
-  #   - URI is dateTime because OWL reasoners do not work with straight date or time
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "time".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Time
-  #   base: XSDTime
-  #   uri: xsd:time
-  #   repr: str
-  # date:
-  #   name: date
-  #   definition_uri: https://w3id.org/linkml/Date
-  #   description: a date (year, month and day) in an idealized calendar
-  #   notes:
-  #   - URI is dateTime because OWL reasoners don't work with straight date or time
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "date".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:Date
-  #   base: XSDDate
-  #   uri: xsd:date
-  #   repr: str
-  # datetime:
-  #   name: datetime
-  #   definition_uri: https://w3id.org/linkml/Datetime
-  #   description: The combination of a date and time
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "datetime".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   exact_mappings:
-  #   - schema:DateTime
-  #   base: XSDDateTime
-  #   uri: xsd:dateTime
-  #   repr: str
-  # date_or_datetime:
-  #   name: date_or_datetime
-  #   definition_uri: https://w3id.org/linkml/DateOrDatetime
-  #   description: Either a date or a datetime
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "date_or_datetime".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: str
-  #   uri: linkml:DateOrDatetime
-  #   repr: str
-  # uriorcurie:
-  #   name: uriorcurie
-  #   definition_uri: https://w3id.org/linkml/Uriorcurie
-  #   description: a URI or a CURIE
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "uriorcurie".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: URIorCURIE
-  #   uri: xsd:anyURI
-  #   repr: str
-  # curie:
-  #   name: curie
-  #   definition_uri: https://w3id.org/linkml/Curie
-  #   conforms_to: https://www.w3.org/TR/curie/
-  #   description: a compact URI
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "curie".
-  #   comments:
-  #   - in RDF serializations this MUST be expanded to a URI
-  #   - in non-RDF serializations MAY be serialized as the compact representation
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: Curie
-  #   uri: xsd:string
-  #   repr: str
-  # uri:
-  #   name: uri
-  #   definition_uri: https://w3id.org/linkml/Uri
-  #   conforms_to: https://www.ietf.org/rfc/rfc3987.txt
-  #   description: a complete URI
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "uri".
-  #   comments:
-  #   - in RDF serializations a slot with range of uri is treated as a literal or type
-  #     xsd:anyURI unless it is an identifier or a reference to an identifier, in which
-  #     case it is translated directly to a node
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   close_mappings:
-  #   - schema:URL
-  #   base: URI
-  #   uri: xsd:anyURI
-  #   repr: str
-  # ncname:
-  #   name: ncname
-  #   definition_uri: https://w3id.org/linkml/Ncname
-  #   description: Prefix part of CURIE
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "ncname".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: NCName
-  #   uri: xsd:string
-  #   repr: str
-  # objectidentifier:
-  #   name: objectidentifier
-  #   definition_uri: https://w3id.org/linkml/Objectidentifier
-  #   description: A URI or CURIE that represents an object in the model.
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "objectidentifier".
-  #   comments:
-  #   - Used for inheritance and type checking
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: ElementIdentifier
-  #   uri: shex:iri
-  #   repr: str
-  # nodeidentifier:
-  #   name: nodeidentifier
-  #   definition_uri: https://w3id.org/linkml/Nodeidentifier
-  #   description: A URI, CURIE or BNODE that represents a node in a model.
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "nodeidentifier".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: NodeIdentifier
-  #   uri: shex:nonLiteral
-  #   repr: str
-  # jsonpointer:
-  #   name: jsonpointer
-  #   definition_uri: https://w3id.org/linkml/Jsonpointer
-  #   conforms_to: https://datatracker.ietf.org/doc/html/rfc6901
-  #   description: A string encoding a JSON Pointer. The value of the string MUST conform
-  #     to JSON Point syntax and SHOULD dereference to a valid object within the current
-  #     instance document when encoded in tree form.
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "jsonpointer".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: str
-  #   uri: xsd:string
-  #   repr: str
-  # jsonpath:
-  #   name: jsonpath
-  #   definition_uri: https://w3id.org/linkml/Jsonpath
-  #   conforms_to: https://www.ietf.org/archive/id/draft-goessner-dispatch-jsonpath-00.html
-  #   description: A string encoding a JSON Path. The value of the string MUST conform
-  #     to JSON Point syntax and SHOULD dereference to zero or more valid objects within
-  #     the current instance document when encoded in tree form.
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "jsonpath".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: str
-  #   uri: xsd:string
-  #   repr: str
-  # sparqlpath:
-  #   name: sparqlpath
-  #   definition_uri: https://w3id.org/linkml/Sparqlpath
-  #   conforms_to: https://www.w3.org/TR/sparql11-query/#propertypaths
-  #   description: A string encoding a SPARQL Property Path. The value of the string
-  #     MUST conform to SPARQL syntax and SHOULD dereference to zero or more valid objects
-  #     within the current instance document when encoded as RDF.
-  #   notes:
-  #   - If you are authoring schemas in LinkML YAML, the type is referenced with the
-  #     lower case "sparqlpath".
-  #   from_schema: https://w3id.org/linkml/types
-  #   imported_from: linkml:types
-  #   base: str
-  #   uri: xsd:string
-  #   repr: str
 slots:
   has attribute:
     name: has attribute