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DESCRIPTION
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Package: DropSift
Type: Package
Title: Distinguish nuclei/cells from empty droplets
Version: 0.99.0
Imports: gridExtra,grid,cowplot,ggrastr,ggplot2,pastecs,hdrcde,Matrix,e1071,
logger,Seurat,data.table,methods,scales,rhdf5,gridGraphics,
cluster,stats,R.utils
Authors@R: c(person("James", "Nemesh", email = "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0009-0000-1822-8255")),
person("Alec", "Wysoker", email = "[email protected]", role = c("aut")))
Description: Distinguish nuclei/cells from empty droplets in a single nucleus/cell experiment.
License: MIT + file LICENSE
LazyData: FALSE
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
Encoding: UTF-8
biocViews: SingleCell, RNASeq, Transcriptomics, Software,
GeneExpression, QualityControl
Suggests:
knitr,
rmarkdown,
testthat (>= 3.0.0),
presto
VignetteBuilder: knitr
Config/testthat/edition: 3
Depends: R (>= 4.4.0)
URL: https://github.com/broadinstitute/DropSift
BugReports: https://github.com/broadinstitute/DropSift/issues