Cleanup file headers: remove license and author contact information (#245)

* Remove copyright headers.

* Repace `contact` with `original author` & remove email address.

* Remove "Original author" headers.

Author: VJalili

dockerfiles/melt/run_MELT_2.0.5.sh

@@ -4,9 +4,6 @@
 #    gnomAD SV Discovery    #
 #############################
 
-# Copyright (c) 2017 Ryan L. Collins
-# Distributed under terms of the MIT License (see LICENSE)
-# Contact: Ryan L. Collins <rlcollins@g.harvard.edu>
 # gnomAD credits: http://gnomad.broadinstitute.org/
 
 # Wrapper to run MELT (Gardner et al., Unpublished)

dockerfiles/rdpesr/Modify_vcf_by_steps.py

@@ -1,8 +1,6 @@
 #!/usr/bin/env python
 # -*- coding: utf-8 -*-
 #
-# Copyright © 2017 Matthew Stone <mstone5@mgh.harvard.edu>
-# Distributed under terms of the MIT license.
 
 """
 """

src/RdTest/localize_bincov.sh

@@ -2,8 +2,6 @@
 #
 # localize_bincov.sh
 #
-# Copyright (C) 2018 Matthew Stone <mstone5@mgh.harvard.edu>
-# Distributed under terms of the MIT license.
 
 set -e
 

src/WGD/LICENSE

@@ -1,10 +1,6 @@
 # WGD
 **W**hole-**G**enome **D**osage: a suite of tools to evaluate dosage in whole-genome sequencing libraries
 
-**Contact:** Ryan Collins (rlcollins@g.harvard.edu)
-
-All code copyright (c) 2018 Ryan Collins and is distributed under terms of the MIT license.  
-
 ---  
 ## Table of Contents  
 #### Examples  

src/WGD/README.md

@@ -1,8 +1,5 @@
 #! /usr/bin/env Rscript
 
-# Copyright (c) 2017 Ryan L. Collins <rlcollins@g.harvard.edu>
-# Distributed under terms of the MIT license.
-
 # Wrapper for WGD R companion library (WGDR) function
 # WGD.sample.summaryplots.R to generate WGD summary plots
 # for a set of libraries in a given coverage matrix

src/WGD/bin/WGDSampleSummaries.R

@@ -1,8 +1,5 @@
 #!/usr/bin/env python
 
-# Copyright (c) 2017 Ryan Collins <rcollins@chgr.mgh.harvard.edu>
-# Distributed under terms of the MIT license.
-
 """
 Calculates non-duplicate primary-aligned binned coverage
 of a chromosome from an input BAM file

src/WGD/bin/binCov.py

@@ -1,8 +1,5 @@
 #!/bin/bash
 
-# Copyright (c) 2017 Ryan Collins <rlcollins@g.harvard.edu>
-# Distributed under terms of the MIT license.
-
 # Batch script to iterate binCov over a supplied list of contigs
 
 set -e

src/WGD/bin/binCov_batch.sh

@@ -1,8 +1,5 @@
 #!/bin/bash
 
-# Copyright (c) 2017 Ryan Collins <rlcollins@g.harvard.edu>
-# Distributed under terms of the MIT license.
-
 # Simple script to split cn.MOPS calls by sample and copy state and merge
 # across multiple runs (e.g. at different resolutions)
 

src/WGD/bin/cleancnMOPS.sh

@@ -1,8 +1,5 @@
 #!/bin/bash
 
-# Copyright (c) 2017 Ryan Collins <rlcollins@g.harvard.edu>
-# Distributed under terms of the MIT license.
-
 # Wrapper script to run cn.MOPS workflow from a list of binCov input files
 
 set -e