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Imported highlightoptionalarg in md file
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website/docs/modules/generate_batch_metrics.md

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slug: gbm
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import { Highlight, HighlightOptionalArg } from "@site/src/components/highlight.js"
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[WDL source code](https://github.com/broadinstitute/gatk-sv/blob/main/wdl/GenerateBatchMetrics.wdl)
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Analyzes variants for RD, BAF, PE, and SR evidence and creates a table of metrics containing raw and statistical
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#### <HighlightOptionalArg>Optional</HighlightOptionalArg> `outlier_sample_ids`
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Provide a file containing sample IDs, delimited by new lines, to exclude from the generation of batch metrics -
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this should can be based on outlier samples identified during sample QC that are still retained in the cohort. If
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provided, the workflow discards any outlier samples from being considered as part of the called samples when
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calculating metrics at a given site, as long as non-outlier samples are also called for that site. It does the
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same for the set of background samples considered in the metric calculations for a given site.
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this should can be based on outlier samples identified following [EvidenceQC](./eqc) that are still retained in
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the cohort. If provided, the workflow discards any outlier samples from being considered as part of the called
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samples when calculating metrics at a given site, as long as non-outlier samples are also called for that site.
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It does the same for the set of background samples considered in the metric calculations for a given site.
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## Outputs
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website/docs/modules/train_gcnv.md

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#### <HighlightOptionalArg>Optional</HighlightOptionalArg> `outlier_sample_ids`
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Provide a file containing sample IDs, delimited by new lines, to exclude from the from the gCNV model training
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process - this should can be based on outlier samples identified during sample QC that are still retained in the
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cohort.
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process - this should can be based on outlier samples identified following [EvidenceQC](./eqc) that are still
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retained in the cohort.
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## Outputs
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