diff --git a/gnomad/assessment/parse_validity_logs.py b/gnomad/assessment/parse_validity_logs.py
index 26de310f5..388c16b5d 100644
--- a/gnomad/assessment/parse_validity_logs.py
+++ b/gnomad/assessment/parse_validity_logs.py
@@ -32,6 +32,10 @@ def parse_log_file(log_file):
         "compare_subset_freqs": "subset freqs",
         "check_globals_for_retired_terms": "globals check",
         "summarize_variant_filters": "variant summary",
+        "validate_config_fields_in_ht": "general info",
+        "log_field_validation_results": "general info",
+        "check_fields_not_in_requirements": "general info",
+        "load_gnomad_data": "load gnomAD data",
     }
 
     with hl.hadoop_open(log_file, "r") as f:
diff --git a/gnomad/assessment/validity_checks.py b/gnomad/assessment/validity_checks.py
index ef9730ac8..c16946fca 100644
--- a/gnomad/assessment/validity_checks.py
+++ b/gnomad/assessment/validity_checks.py
@@ -1449,7 +1449,7 @@ def check_missingness_of_struct(
     struct_expr: hl.expr.StructExpression, prefix: str = ""
 ) -> Dict[str, Any]:
     """
-    Recursively check the fraction of missing values of all fields within a StructExpression.
+    Recursively check the number of missing values of all fields within a StructExpression.
 
     Either a standalone or nested struct can be provided. If the struct contains an array (or set) of values, the array
     will be considered missing if it is NA, an empty array, or only has missing elements.
@@ -1468,11 +1468,9 @@ def check_missingness_of_struct(
     elif isinstance(struct_expr, (hl.expr.ArrayExpression, hl.expr.SetExpression)):
         # Count array/set as missing if it is NA, an empty array/set, or only has missing
         # elements.
-        return hl.agg.fraction(
-            hl.or_else(struct_expr.all(lambda x: hl.is_missing(x)), True)
-        )
+        return hl.agg.sum(hl.or_else(struct_expr.all(lambda x: hl.is_missing(x)), True))
     else:
-        return hl.agg.fraction(hl.is_missing(struct_expr))
+        return hl.agg.sum(hl.is_missing(struct_expr))
 
 
 def flatten_missingness_struct(