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‎hidive/assemble/fn.start.html‎

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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `start` fn in crate `hidive`."><title>start in hidive::assemble - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc fn"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.116</span></h2></div><div class="sidebar-elems"><div id="rustdoc-modnav"><h2><a href="index.html">In hidive::<wbr>assemble</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a>::<wbr><a href="index.html">assemble</a></div><h1>Function <span class="fn">start</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/assemble.rs.html#13-113">Source</a> </span></div><pre class="rust item-decl"><code>pub fn start(
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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `start` fn in crate `hidive`."><title>start in hidive::assemble - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc fn"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.117</span></h2></div><div class="sidebar-elems"><div id="rustdoc-modnav"><h2><a href="index.html">In hidive::<wbr>assemble</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a>::<wbr><a href="index.html">assemble</a></div><h1>Function <span class="fn">start</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/assemble.rs.html#13-113">Source</a> </span></div><pre class="rust item-decl"><code>pub fn start(
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output: &amp;<a class="struct" href="https://doc.rust-lang.org/1.87.0/std/path/struct.PathBuf.html" title="struct std::path::PathBuf">PathBuf</a>,
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gfa_output: <a class="enum" href="https://doc.rust-lang.org/1.87.0/core/option/enum.Option.html" title="enum core::option::Option">Option</a>&lt;<a class="struct" href="https://doc.rust-lang.org/1.87.0/std/path/struct.PathBuf.html" title="struct std::path::PathBuf">PathBuf</a>&gt;,
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kmer_size: <a class="primitive" href="https://doc.rust-lang.org/1.87.0/std/primitive.usize.html">usize</a>,

‎hidive/assemble/index.html‎

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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `assemble` mod in crate `hidive`."><title>hidive::assemble - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="../sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc mod"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.116</span></h2></div><div class="sidebar-elems"><section id="rustdoc-toc"><h2 class="location"><a href="#">Module assemble</a></h2><h3><a href="#functions">Module Items</a></h3><ul class="block"><li><a href="#functions" title="Functions">Functions</a></li></ul></section><div id="rustdoc-modnav"><h2 class="in-crate"><a href="../index.html">In crate hidive</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a></div><h1>Module <span>assemble</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/assemble.rs.html#1-113">Source</a> </span></div><h2 id="functions" class="section-header">Functions<a href="#functions" class="anchor">§</a></h2><dl class="item-table"><dt><a class="fn" href="fn.start.html" title="fn hidive::assemble::start">start</a></dt></dl></section></div></main></body></html>
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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `assemble` mod in crate `hidive`."><title>hidive::assemble - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="../sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc mod"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.117</span></h2></div><div class="sidebar-elems"><section id="rustdoc-toc"><h2 class="location"><a href="#">Module assemble</a></h2><h3><a href="#functions">Module Items</a></h3><ul class="block"><li><a href="#functions" title="Functions">Functions</a></li></ul></section><div id="rustdoc-modnav"><h2 class="in-crate"><a href="../index.html">In crate hidive</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a></div><h1>Module <span>assemble</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/assemble.rs.html#1-113">Source</a> </span></div><h2 id="functions" class="section-header">Functions<a href="#functions" class="anchor">§</a></h2><dl class="item-table"><dt><a class="fn" href="fn.start.html" title="fn hidive::assemble::start">start</a></dt></dl></section></div></main></body></html>

‎hidive/build/fn.construct_edges.html‎

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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `construct_edges` fn in crate `hidive`."><title>construct_edges in hidive::build - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc fn"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.116</span></h2></div><div class="sidebar-elems"><div id="rustdoc-modnav"><h2><a href="index.html">In hidive::<wbr>build</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a>::<wbr><a href="index.html">build</a></div><h1>Function <span class="fn">construct_edges</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/build.rs.html#247-324">Source</a> </span></div><pre class="rust item-decl"><code>pub fn construct_edges(
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<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="API documentation for the Rust `construct_edges` fn in crate `hidive`."><title>construct_edges in hidive::build - Rust</title><script>if(window.location.protocol!=="file:")document.head.insertAdjacentHTML("beforeend","SourceSerif4-Regular-6b053e98.ttf.woff2,FiraSans-Italic-81dc35de.woff2,FiraSans-Regular-0fe48ade.woff2,FiraSans-MediumItalic-ccf7e434.woff2,FiraSans-Medium-e1aa3f0a.woff2,SourceCodePro-Regular-8badfe75.ttf.woff2,SourceCodePro-Semibold-aa29a496.ttf.woff2".split(",").map(f=>`<link rel="preload" as="font" type="font/woff2" crossorigin href="../../static.files/${f}">`).join(""))</script><link rel="stylesheet" href="../../static.files/normalize-9960930a.css"><link rel="stylesheet" href="../../static.files/rustdoc-916cea96.css"><meta name="rustdoc-vars" data-root-path="../../" data-static-root-path="../../static.files/" data-current-crate="hidive" data-themes="" data-resource-suffix="" data-rustdoc-version="1.87.0 (17067e9ac 2025-05-09)" data-channel="1.87.0" data-search-js="search-e7298875.js" data-settings-js="settings-d72f25bb.js" ><script src="../../static.files/storage-82c7156e.js"></script><script defer src="sidebar-items.js"></script><script defer src="../../static.files/main-fb8c74a8.js"></script><noscript><link rel="stylesheet" href="../../static.files/noscript-893ab5e7.css"></noscript><link rel="alternate icon" type="image/png" href="../../static.files/favicon-32x32-6580c154.png"><link rel="icon" type="image/svg+xml" href="../../static.files/favicon-044be391.svg"></head><body class="rustdoc fn"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="mobile-topbar"><button class="sidebar-menu-toggle" title="show sidebar"></button></nav><nav class="sidebar"><div class="sidebar-crate"><h2><a href="../../hidive/index.html">hidive</a><span class="version">0.1.117</span></h2></div><div class="sidebar-elems"><div id="rustdoc-modnav"><h2><a href="index.html">In hidive::<wbr>build</a></h2></div></div></nav><div class="sidebar-resizer"></div><main><div class="width-limiter"><rustdoc-search></rustdoc-search><section id="main-content" class="content"><div class="main-heading"><div class="rustdoc-breadcrumbs"><a href="../index.html">hidive</a>::<wbr><a href="index.html">build</a></div><h1>Function <span class="fn">construct_edges</span><button id="copy-path" title="Copy item path to clipboard">Copy item path</button></h1><rustdoc-toolbar></rustdoc-toolbar><span class="sub-heading"><a class="src" href="../../src/hidive/build.rs.html#247-324">Source</a> </span></div><pre class="rust item-decl"><code>pub fn construct_edges(
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src_pos: <a class="primitive" href="https://doc.rust-lang.org/1.87.0/std/primitive.usize.html">usize</a>,
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dst_pos: <a class="primitive" href="https://doc.rust-lang.org/1.87.0/std/primitive.usize.html">usize</a>,
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k: <a class="primitive" href="https://doc.rust-lang.org/1.87.0/std/primitive.usize.html">usize</a>,

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