Minor changes to dorado wdl

Author: jonn-smith

wdl/pipelines/ONT/Preprocessing/ONTBasecallDorado.wdl

@@ -151,13 +151,14 @@ task Basecall {
         RuntimeAttr? runtime_attr_override
     }
 
-    Int disk_size = 7 * ceil(size(fast5_files, "GB"))
+    Int disk_size = 10 * ceil(size(fast5_files, "GB")) + ceil(size(ref_fasta)) + ceil(size(ref_index)) + ceil(size(ref_fasta_dict))
 
     String ref_arg = if defined(ref_fasta) then "--reference " else ""
     String demux_arg = if defined(kit_name) then "--kit-name "+kit_name else "--no-classify"
     String bc_kit_arg = if defined(kit_name) then "--kit-name "+kit_name else ""
+
     command <<<
-        set -x
+        set -euxo pipefail
 
         dorado basecaller \
             -r \