Skip to content

Commit db3b126

Browse files
committed
Added missing mkdir
1 parent 8867834 commit db3b126

File tree

1 file changed

+1
-0
lines changed

1 file changed

+1
-0
lines changed

wdl/pipelines/ONT/Preprocessing/ONTBasecallDorado.wdl

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -192,6 +192,7 @@ task Basecall {
192192
193193
# Get list of output files:
194194
DEST_DIR=dorado_bams
195+
mkdir -p $DEST_DIR
195196
find dorado_output/ -type f -name "*.bam" -print0 | while IFS= read -r -d '' f; do
196197
base_name=$(basename "$f")
197198
dest_path="$DEST_DIR/$base_name"

0 commit comments

Comments
 (0)