protigy-v2/NAMESPACE at main · broadinstitute/protigy-v2 · GitHub

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# Generated by roxygen2: do not edit by hand

export(launchApp)
import(ComplexHeatmap)
import(RColorBrewer)
import(circlize)
import(cmapR)
import(dplyr)
import(ggfortify)
import(ggplot2)
import(ggrepel)
import(glue)
import(janitor)
import(khroma)
import(limma)
import(markdown)
import(shiny, except=c(dataTableOutput, renderDataTable, runExample))
import(shinyBS)
import(shinyWidgets)
import(snakecase)
import(stringr)
import(tidyr)
importFrom(DT,dataTableOutput)
importFrom(DT,datatable)
importFrom(DT,renderDataTable)
importFrom(Matrix,Matrix)
importFrom(Matrix,crossprod)
importFrom(Matrix,tcrossprod)
importFrom(RColorBrewer,brewer.pal)
importFrom(WriteXLS,WriteXLS)
importFrom(circlize,colorRamp2)
importFrom(colourpicker,colourInput)
importFrom(colourpicker,updateColourInput)
importFrom(furrr,future_map)
importFrom(furrr,future_map2)
importFrom(future,availableCores)
importFrom(future,plan)
importFrom(ggthemes,geom_tufteboxplot)
importFrom(grDevices,boxplot.stats)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grid,gpar)
importFrom(mclust,Mclust)
importFrom(mclust,mclustBIC)
importFrom(methods,existsFunction)
importFrom(methods,new)
importFrom(mixtools,normalmixEM)
importFrom(plotly,add_annotations)
importFrom(plotly,event_data)
importFrom(plotly,event_register)
importFrom(plotly,ggplotly)
importFrom(plotly,layout)
importFrom(plotly,plotlyOutput)
importFrom(plotly,renderPlotly)
importFrom(plotly,style)
importFrom(preprocessCore,normalize.quantiles)
importFrom(rlang,.data)
importFrom(shiny,shinyApp)
importFrom(shinyBS,tipify)
importFrom(shinydashboard,dashboardBody)
importFrom(shinydashboard,dashboardSidebar)
importFrom(shinydashboardPlus,box)
importFrom(shinydashboardPlus,boxDropdown)
importFrom(shinydashboardPlus,boxSidebar)
importFrom(shinydashboardPlus,dashboardHeader)
importFrom(shinydashboardPlus,dashboardPage)
importFrom(shinyjqui,orderInput)
importFrom(shinyjqui,updateOrderInput)
importFrom(stats,aggregate)
importFrom(stats,anova)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,cor)
importFrom(stats,density)
importFrom(stats,lm)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,prcomp)
importFrom(stats,qnorm)
importFrom(stats,qt)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,var)
importFrom(stringr,str_sub)
importFrom(utils,combn)
importFrom(utils,compareVersion)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(utils,stack)
importFrom(utils,tail)
importFrom(utils,write.csv)
importFrom(utils,write.table)
importFrom(vsn,justvsn)
importFrom(yaml,read_yaml)
importFrom(yaml,write_yaml)
importFrom(zip,zip)