Merge pull request #37 from broadinstitute/gui #42
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| name: Tests | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| permissions: | |
| contents: read | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: environment.yml | |
| cache-environment: true | |
| - name: Install package | |
| run: pip install -e ".[dev]" | |
| shell: micromamba-shell {0} | |
| - name: Run tests with coverage | |
| run: pytest tests/ -v --cov=qprimer_designer --cov-report=xml | |
| shell: micromamba-shell {0} | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: ./coverage.xml | |
| fail_ci_if_error: false | |
| verbose: true |