Add rasusa-based coverage normalization for assembly polishing #70

	name: Documentation

	on:
	push:
	branches:
	- main
	- '**'
	paths:
	- 'docs/**'
	- 'src/viral_ngs/**'
	- '.readthedocs.yml'
	- '.github/workflows/docs.yml'
	pull_request:
	branches:
	- main
	paths:
	- 'docs/**'
	- 'src/viral_ngs/**'
	- '.readthedocs.yml'
	- '.github/workflows/docs.yml'

	jobs:
	build-docs:
	runs-on: ubuntu-latest
	permissions:
	contents: read

	steps:
	- name: Checkout repository
	uses: actions/checkout@v4
	with:
	fetch-depth: 0 # Full history for git describe version

	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: '3.10'

	- name: Install dependencies
	run: \|
	pip install -r docs/requirements.txt
	pip install -e .

	- name: Build documentation
	run: \|
	cd docs
	sphinx-build -W -b html . _build/html

	- name: Upload documentation artifact
	uses: actions/upload-artifact@v4
	with:
	name: documentation
	path: docs/_build/html/
	retention-days: 7

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