Merge pull request #394 from broadinstitute/pangolin

update pangolin docker

Author: dpark01

pipes/WDL/tasks/tasks_sarscov2.wdl

@@ -10,7 +10,7 @@ task pangolin_one_sample {
         Float?  max_ambig
         Boolean inference_usher=true
         Boolean update_dbs_now=false
-        String  docker = "quay.io/staphb/pangolin:3.1.16-pangolearn-2021-11-09"
+        String  docker = "quay.io/staphb/pangolin:3.1.16-pangolearn-2021-11-25"
     }
     String basename = basename(genome_fasta, ".fasta")
     command <<<
@@ -88,7 +88,7 @@ task pangolin_many_samples {
         Boolean      inference_usher=true
         Boolean      update_dbs_now=false
         String       basename
-        String       docker = "quay.io/staphb/pangolin:3.1.16-pangolearn-2021-11-09"
+        String       docker = "quay.io/staphb/pangolin:3.1.16-pangolearn-2021-11-25"
     }
     command <<<
         set -ex

requirements-modules.txt

@@ -7,5 +7,5 @@ broadinstitute/beast-beagle-cuda=1.10.5pre
 broadinstitute/ncbi-tools=2.10.7.10
 nextstrain/base=build-20211012T204409Z
 andersenlabapps/ivar=1.3.1
-quay.io/staphb/pangolin=3.1.16-pangolearn-2021-11-09
+quay.io/staphb/pangolin=3.1.16-pangolearn-2021-11-25
 nextstrain/nextclade=1.4.0