broadinstitute
diff --git a/‎…BroadInternalUltimaGenomics.changelog.md‎ ‎…BroadInternalUltimaGenomics.changelog.md‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.changelog.md renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.changelog.md
Lines changed: 5 additions & 0 deletions b/‎…BroadInternalUltimaGenomics.changelog.md‎ ‎…BroadInternalUltimaGenomics.changelog.md‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.changelog.md renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.changelog.md
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diff --git a/‎…Genomics/BroadInternalUltimaGenomics.wdl‎ ‎…Genomics/BroadInternalUltimaGenomics.wdl‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.wdl renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.wdl
Lines changed: 1 addition & 1 deletion b/‎…Genomics/BroadInternalUltimaGenomics.wdl‎ ‎…Genomics/BroadInternalUltimaGenomics.wdl‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.wdl renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimaGenomics.wdl
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diff --git a/‎…BroadInternalUltimeGenomics.options.json‎ ‎…BroadInternalUltimeGenomics.options.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimeGenomics.options.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimeGenomics.options.json b/‎…BroadInternalUltimeGenomics.options.json‎ ‎…BroadInternalUltimeGenomics.options.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimeGenomics.options.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/BroadInternalUltimeGenomics.options.json
diff --git a/‎…wdls/TestBroadInternalUltimaGenomics.wdl‎ ‎…mics/TestBroadInternalUltimaGenomics.wdl‎verification/test-wdls/TestBroadInternalUltimaGenomics.wdl renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/TestBroadInternalUltimaGenomics.wdl b/‎…wdls/TestBroadInternalUltimaGenomics.wdl‎ ‎…mics/TestBroadInternalUltimaGenomics.wdl‎verification/test-wdls/TestBroadInternalUltimaGenomics.wdl renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/TestBroadInternalUltimaGenomics.wdl
diff --git a/‎…inputs/Plumbing/NA12878.downsampled.json‎ ‎…inputs/Plumbing/NA12878.downsampled.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Plumbing/NA12878.downsampled.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Plumbing/NA12878.downsampled.json b/‎…inputs/Plumbing/NA12878.downsampled.json‎ ‎…inputs/Plumbing/NA12878.downsampled.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Plumbing/NA12878.downsampled.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Plumbing/NA12878.downsampled.json
diff --git a/‎…mics/test_inputs/Scientific/NA12878.json‎ ‎…mics/test_inputs/Scientific/NA12878.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Scientific/NA12878.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Scientific/NA12878.json b/‎…mics/test_inputs/Scientific/NA12878.json‎ ‎…mics/test_inputs/Scientific/NA12878.json‎pipelines/broad/internal/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Scientific/NA12878.json renamed to deprecated/pipelines/dna_seq/germline/single_sample/UltimaGenomics/test_inputs/Scientific/NA12878.json
@@ -1,3 +1,8 @@
+# 1.1.4
+2025-03-06 (Date of Last Commit)
+
+* The BroadInternalUltimaGenomics workflow is deprecated and is no longer supported.
+
 # 1.1.3
 2024-12-05 (Date of Last Commit)
 
 
@@ -6,7 +6,7 @@ import "../../../../../../../pipelines/broad/qc/CheckFingerprint.wdl" as FP
 
 workflow BroadInternalUltimaGenomics {
 
-  String pipeline_version = "1.1.3"
+  String pipeline_version = "1.1.4"
 
   input {