Hello, and thank you for creating this tool!
I started implementing the WOT method on a fresh environment and realized that WOT is currently not compatible with versions of Anndata from v0.12 onwards, when anndata.read was removed (https://anndata.readthedocs.io/en/latest/release-notes/index.html#v0-12-0)
I had to downgrade Anndata to v.0.11.4 and, while wot.io.read_dataset() now runs, it still gives me the warning:
Thanks a lot!
Hello, and thank you for creating this tool!
I started implementing the WOT method on a fresh environment and realized that WOT is currently not compatible with versions of Anndata from v0.12 onwards, when anndata.read was removed (https://anndata.readthedocs.io/en/latest/release-notes/index.html#v0-12-0)
I had to downgrade Anndata to v.0.11.4 and, while wot.io.read_dataset() now runs, it still gives me the warning:
Thanks a lot!