chore(deps): bump codecov/codecov-action from 6 to 7 #170
Workflow file for this run
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| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | |
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths: | |
| - '**.R' | |
| - '**R-CMD-check.yml' | |
| branches: | |
| - main | |
| - master | |
| pull_request: | |
| branches: | |
| - main | |
| - master | |
| name: R-CMD-check | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) - py${{ matrix.config.python-version }} - geedim ${{ matrix.config.geedim-version }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macos-latest, r: 'release', geedim-version: 'latest', python-version: '3.13', authenticate: false} | |
| - {os: windows-latest, r: 'release', geedim-version: 'latest', python-version: '3.13', authenticate: false} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release', geedim-version: 'latest', python-version: '3.14', authenticate: true} | |
| - {os: ubuntu-latest, r: 'release', geedim-version: 'latest', python-version: '3.13', authenticate: true} | |
| - {os: ubuntu-latest, r: 'release', geedim-version: '1.9.0', python-version: '3.12', authenticate: true} | |
| - {os: ubuntu-22.04, r: '3.6', geedim-version: 'latest', python-version: '3.11', authenticate: false} | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| GOOGLE_CLOUD_QUOTA_PROJECT: ${{ secrets.GCP_PROJECT_ID }} | |
| WIF_PROVIDER: ${{ secrets.WIF_PROVIDER }} | |
| GCP_SA_EMAIL: ${{ secrets.GCP_SA_EMAIL }} | |
| R_RGEEDIM_RUN_EXAMPLES: ${{ matrix.config.authenticate && matrix.config.r == 'devel' && 'TRUE' || 'FALSE' }} | |
| R_RGEEDIM_PYTHON_ENVNAME: "r-rgeedim" | |
| steps: | |
| - uses: actions/checkout@v6 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| - uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.config.python-version }} | |
| architecture: 'x64' | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Install system dependencies (macOS) | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install gdal | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck, rstudio/reticulate, any::remotes, local::. | |
| needs: check | |
| - name: Install Python dependencies | |
| run: | | |
| venv_path <- reticulate::virtualenv_create("r-rgeedim", version = "${{ matrix.config.python-version }}") | |
| reticulate::use_virtualenv("r-rgeedim") | |
| if (Sys.info()["sysname"] == "Windows") { | |
| python_path <- normalizePath(file.path(path.expand(venv_path), "Scripts", "python.exe")) | |
| remotes::install_github("brownag/rgeowheels") | |
| rgeowheels::set_rgeowheels_python(python_path) | |
| py_version <- reticulate::py_config()$version | |
| rgeowheels::install_wheel("gdal", pyversion = substr(py_version, 1, 4)) | |
| rgeowheels::install_wheel("rasterio", pyversion = substr(py_version, 1, 4)) | |
| } | |
| if ("${{ matrix.config.geedim-version }}" == "latest") { | |
| reticulate::virtualenv_install("r-rgeedim", "geedim") | |
| } else { | |
| reticulate::virtualenv_install("r-rgeedim", paste0("geedim==", "${{ matrix.config.geedim-version }}")) | |
| } | |
| print(reticulate::py_config()) | |
| shell: Rscript {0} | |
| - name: Authenticate to Google Cloud (WIF) | |
| if: matrix.config.authenticate == true | |
| uses: 'google-github-actions/auth@v3' | |
| with: | |
| workload_identity_provider: ${{ secrets.WIF_PROVIDER }} | |
| service_account: ${{ secrets.GCP_SA_EMAIL }} | |
| - name: Set up Google Application Credentials for rgeedim | |
| if: matrix.config.authenticate == true | |
| run: | | |
| creds_file <- Sys.getenv("GOOGLE_APPLICATION_CREDENTIALS") | |
| if (creds_file == "" || !file.exists(creds_file)) { | |
| stop("GOOGLE_APPLICATION_CREDENTIALS not set or file does not exist") | |
| } | |
| shell: Rscript {0} | |
| - name: Authenticate with Earth Engine | |
| if: matrix.config.authenticate == true | |
| run: | | |
| rgeedim::gd_authenticate(quiet = TRUE) | |
| rgeedim::gd_initialize(quiet = FALSE) | |
| if (rgeedim::gd_is_initialized()) { | |
| cat("Earth Engine successfully initialized!\n") | |
| } else { | |
| cat("Earth Engine failed to initialize.\n") | |
| } | |
| shell: Rscript {0} | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |