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Merge pull request #723 from cambridge-cares/dev-UnitTest-TBoxGenerator
dev-UnitTest-TBoxGenerator Added three Unit Tests
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‎JPS_BASE_LIB/src/test/java/uk/ac/cam/cares/jps/base/converter/test/TBoxGenerationTest.java‎

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@@ -31,12 +31,20 @@ public class TBoxGenerationTest {
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_3 = "sample-tbox-template-input-3.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_4 = "sample-tbox-template-input-4.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_5 = "sample-tbox-template-input-5.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_6 = "sample-tbox-template-input-6.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_7 = "sample-tbox-template-input-7.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_8 = "sample-tbox-template-input-8.csv";
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private final String SAMPLE_TBOX_CSV_TEMPLATE_FILE_9 = "sample-tbox-template-input-9.csv";
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private final String REFERENCE_OWL_FILE_1 = "sample-tbox-template-input-1.owl";
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private final String REFERENCE_OWL_FILE_2 = "sample-tbox-template-input-2.owl";
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private final String REFERENCE_OWL_FILE_3 = "sample-tbox-template-input-3.owl";
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private final String REFERENCE_OWL_FILE_4 = "sample-tbox-template-input-4.owl";
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private final String REFERENCE_OWL_FILE_5 = "sample-tbox-template-input-5.owl";
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private final String REFERENCE_OWL_FILE_6 = "sample-tbox-template-input-6.owl";
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private final String REFERENCE_OWL_FILE_7 = "sample-tbox-template-input-7.owl";
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private final String REFERENCE_OWL_FILE_8 = "sample-tbox-template-input-8.owl";
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private final String REFERENCE_OWL_FILE_9 = "sample-tbox-template-input-9.owl";
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private final String FILE_EXTENSION_CSV = ".csv";
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private final String FILE_EXTENSION_OWL = ".owl";
@@ -140,7 +148,93 @@ public void testClassEquivalentRelation(){
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assertEquals(referenceOntology.getAxiomCount(), generatedOntology.getAxiomCount());
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assertEquals(referenceOntology.getAxioms(), generatedOntology.getAxioms());
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}
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/**
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* This is to test if the Domain-Range will not be created when:
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* (a) there is a presence of a Quantifier in the Domain-Range relationship
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* AND
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* (b) when there IS-A relation between the ancestors of the Domain and Range with the same Object Property
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*/
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@Test
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public void testSkipDomainRangeCreation(){
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OWLOntology generatedOntology = generateOntology(SAMPLE_CSV_FILE_PATH+SAMPLE_TBOX_CSV_TEMPLATE_FILE_6);
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if (generatedOntology == null) {
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throw new JPSRuntimeException("The requested CSV file could not be converted into an ontology.");
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}
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OWLOntology referenceOntology = readReferenceOntology(REFERENCE_OWL_FILE_PATH+REFERENCE_OWL_FILE_6);
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if (referenceOntology == null) {
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throw new JPSRuntimeException("The requested reference ontology could not be read from the provided path.");
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}
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assertEquals(referenceOntology.getAxiomCount(), generatedOntology.getAxiomCount());
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assertEquals(referenceOntology.getAxioms(), generatedOntology.getAxioms());
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}
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/**
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* This is to test if the Domain-Range that are Union-ed will not be created when:
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* (a) there is a presence of a Quantifier in the Domain-Range relationship
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* AND
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* (b) when there IS-A relation between the ancestors of the Domain and Range with the same Object Property
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*/
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@Test
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public void testSkipDomainRangeCreationUnion(){
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OWLOntology generatedOntology = generateOntology(SAMPLE_CSV_FILE_PATH+SAMPLE_TBOX_CSV_TEMPLATE_FILE_7);
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if (generatedOntology == null) {
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throw new JPSRuntimeException("The requested CSV file could not be converted into an ontology.");
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}
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OWLOntology referenceOntology = readReferenceOntology(REFERENCE_OWL_FILE_PATH+REFERENCE_OWL_FILE_7);
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if (referenceOntology == null) {
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throw new JPSRuntimeException("The requested reference ontology could not be read from the provided path.");
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}
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assertEquals(referenceOntology.getAxiomCount(), generatedOntology.getAxiomCount());
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assertEquals(referenceOntology.getAxioms(), generatedOntology.getAxioms());
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}
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/**
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* This is to test if the Domain-Range that are Intersect-ed will not be created when:
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* (a) there is a presence of a Quantifier in the Domain-Range relationship
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* AND
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* (b) when there IS-A relation between the ancestors of the Domain and Range with the same Object Property
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*/
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@Test
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public void testSkipDomainRangeCreationIntersection(){
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OWLOntology generatedOntology = generateOntology(SAMPLE_CSV_FILE_PATH+SAMPLE_TBOX_CSV_TEMPLATE_FILE_8);
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if (generatedOntology == null) {
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throw new JPSRuntimeException("The requested CSV file could not be converted into an ontology.");
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}
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OWLOntology referenceOntology = readReferenceOntology(REFERENCE_OWL_FILE_PATH+REFERENCE_OWL_FILE_8);
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if (referenceOntology == null) {
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throw new JPSRuntimeException("The requested reference ontology could not be read from the provided path.");
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}
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assertEquals(referenceOntology.getAxiomCount(), generatedOntology.getAxiomCount());
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assertEquals(referenceOntology.getAxioms(), generatedOntology.getAxioms());
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}
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/**
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* This is to test if the Domain-Range creation with a mix of Union and Intersect are created correctly
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*/
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@Test
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public void testSkipDomainRangeCreationWithUnionAndIntersectionMix(){
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OWLOntology generatedOntology = generateOntology(SAMPLE_CSV_FILE_PATH+SAMPLE_TBOX_CSV_TEMPLATE_FILE_9);
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if (generatedOntology == null) {
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throw new JPSRuntimeException("The requested CSV file could not be converted into an ontology.");
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}
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OWLOntology referenceOntology = readReferenceOntology(REFERENCE_OWL_FILE_PATH+REFERENCE_OWL_FILE_9);
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if (referenceOntology == null) {
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throw new JPSRuntimeException("The requested reference ontology could not be read from the provided path.");
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}
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assertEquals(referenceOntology.getAxiomCount(), generatedOntology.getAxiomCount());
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assertEquals(referenceOntology.getAxioms(), generatedOntology.getAxioms());
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}
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/**
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* Reads an ontology from a file located in the file system.
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*

‎JPS_BASE_LIB/src/test/resources/TBoxManagerTest/csv/sample-tbox-template-input-9.csv‎

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@@ -0,0 +1,28 @@
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Source,Type,Target,Relation,Domain,Range,Quantifier,Comment,Defined By,Label
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TestTBox,TBox,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,https://www.w3.org/2007/05/powder-s#hasIRI,,,,,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,
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TestTBox,TBox,1,http://www.w3.org/2002/07/owl#versionInfo,,,,,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,
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TestTBox,TBox,OntoKin is an ontology developed for representing chemical kinetic reaction mechanisms.,http://www.w3.org/2000/01/rdf-schema#comment,,,,,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,
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TestTBox,TBox,,http://www.w3.org/2002/07/owl#imports,,,,,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,
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A,Class,,,,,,Comment for A,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,A
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B,Class,A,IS-A,,,,Comment for B,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,B
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C,Class,B,IS-A,,,,Comment for C,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,C
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D,Class,,,,,,Comment for D,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,D
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E,Class,,,,,,Comment for E,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,E
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F,Class,,,,,,Comment for F,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,F
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G,Class,,,,,,Comment for G,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,G
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I,Class,,,,,,Comment for I,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,I
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J,Class,,,,,,Comment for J,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,J
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K,Class,,,,,,Comment for K,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,K
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L,Class,,,,,,Comment for L,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,L
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M,Class,,,,,,Comment for M,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,M
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N,Class,,,,,,Comment for N,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,N
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O,Class,,,,,,Comment for O,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,O
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X,Class,,,,,,Comment for X,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,X
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Y,Class,X,IS-A,,,,Comment for Y,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,Y
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Z,Class,Y,IS-A,,,,Comment for Z,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,Z
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has,Object Property,,,A,X,,Comment for A has X,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,has
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has,Object Property,,,B UNION D,Y UNION E,some,Comment for B has Y,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,has
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has,Object Property,,,C UNION F,Z,only,Comment for C has Z,http://www.theworldavatar.com/ontology/testtbox/TestTBox.owl,has
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hasR,Object Property,,,G,I INTERSECTION J,some,Comment for G hasR I Union J,,hasR
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hasRel,Object Property,,,K INTERSECTION L,M INTERSECTION N INTERSECTION O,only,,,hasRel
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hasRel,Object Property,,,K INTERSECTION L,M INTERSECTION N INTERSECTION O,some,,,hasRel

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