Merge pull request #363 from jo-mueller/add-quantitiative-comparison-to-validation

jo-mueller · web-flow · commit 9e413ea5435d · 2024-05-14T16:27:06.000+02:00
added stress results to docs
diff --git a/.github/workflows/test_and_deploy.yml b/.github/workflows/test_and_deploy.yml
@@ -19,7 +19,7 @@ jobs:
     runs-on: ${{ matrix.platform }}
     strategy:
       matrix:
-        platform: [windows-latest, macos-latest, ubuntu-latest] # ubuntu-latest is failing anyway
+        platform: [windows-latest, ubuntu-latest] # ubuntu-latest is failing anyway
         python-version: ['3.9', '3.10']
 
     steps:
diff --git a/docs/04_FAQ/validation/results_STRESS/stress_cell_anisotropy.csv b/docs/04_FAQ/validation/results_STRESS/stress_cell_anisotropy.csv
@@ -0,0 +1 @@
+0.524951029307148,0.407845043678024,0.472380721701271,0.471399851268574,0.452322148391233,0.434223055756759,0.445263054314131,0.506756745353556,0.457422981355513,0.446679748263,0.4885976390989,0.458108229369024,0.433761319504799,0.438116746148655,0.408743888008161,0.412814201947951,0.465361309792844,0.510192554233431,0.509626755754551,0.495214508756522,0.509360922135206
diff --git a/docs/04_FAQ/validation/results_STRESS/stress_tissue_anisotropy.csv b/docs/04_FAQ/validation/results_STRESS/stress_tissue_anisotropy.csv
@@ -0,0 +1 @@
+0.180941080361315,0.19090693931055,0.187432328931345,0.191468211744575,0.192152588020158,0.196308867180905,0.197673229567689,0.196143391288799,0.192444626470406,0.194451377490666,0.204687876775861,0.201838581384384,0.20738641015277,0.217224119280949,0.213233939628832,0.217977933213939,0.225847322965684,0.223280020529435,0.225660673965049,0.244978531879758,0.259584498276989
diff --git a/docs/04_FAQ/validation/results_STRESS/stress_total_anisotropy.csv b/docs/04_FAQ/validation/results_STRESS/stress_total_anisotropy.csv
@@ -0,0 +1 @@
+0.538625190835158,0.429125113080733,0.481250941623874,0.489507091362798,0.461885480480367,0.450246269858693,0.492800367918872,0.542137452458625,0.498026612632717,0.480078337313812,0.526143224649039,0.511724762948824,0.48611691987535,0.484248110617798,0.457012058368178,0.461330101150194,0.514228201631385,0.553677843335667,0.540785326858964,0.559606871845935,0.563297775167986
diff --git a/docs/04_FAQ/validation/validation_stress_paper.ipynb b/docs/04_FAQ/validation/validation_stress_paper.ipynb
diff --git a/src/napari_stress/_approximation/expansion_base.py b/src/napari_stress/_approximation/expansion_base.py
@@ -1,4 +1,3 @@
-import numpy as np
 from abc import ABC, abstractmethod
 
 

Original file line number	Diff line number	Diff line change
`@@ -0,0 +1 @@`
	`1`	`+0.524951029307148,0.407845043678024,0.472380721701271,0.471399851268574,0.452322148391233,0.434223055756759,0.445263054314131,0.506756745353556,0.457422981355513,0.446679748263,0.4885976390989,0.458108229369024,0.433761319504799,0.438116746148655,0.408743888008161,0.412814201947951,0.465361309792844,0.510192554233431,0.509626755754551,0.495214508756522,0.509360922135206`
Original file line number	Diff line number	Diff line change
`@@ -0,0 +1 @@`
	`1`	`+0.180941080361315,0.19090693931055,0.187432328931345,0.191468211744575,0.192152588020158,0.196308867180905,0.197673229567689,0.196143391288799,0.192444626470406,0.194451377490666,0.204687876775861,0.201838581384384,0.20738641015277,0.217224119280949,0.213233939628832,0.217977933213939,0.225847322965684,0.223280020529435,0.225660673965049,0.244978531879758,0.259584498276989`
Original file line number	Diff line number	Diff line change
`@@ -0,0 +1 @@`
	`1`	`+0.538625190835158,0.429125113080733,0.481250941623874,0.489507091362798,0.461885480480367,0.450246269858693,0.492800367918872,0.542137452458625,0.498026612632717,0.480078337313812,0.526143224649039,0.511724762948824,0.48611691987535,0.484248110617798,0.457012058368178,0.461330101150194,0.514228201631385,0.553677843335667,0.540785326858964,0.559606871845935,0.563297775167986`
Original file line number	Diff line number	Diff line change
`@@ -1,4 +1,3 @@`
`1`		`-import numpy as np`
`2`	`1`	`from abc import ABC, abstractmethod`
`3`	`2`
`4`	`3`