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[envp] extend also corrected reads back to full length
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viloca/shotgun.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -656,8 +656,8 @@ def main(args):
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open(f"raw_reads/{stem}.envp-full-ref.fas"),
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open(f"raw_reads/{stem}.envp-ref.fas"),
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f"corrected/{stem}.reads-cor.fas",
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f"corrected/{stem}.reads-cor.full.fas"
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)
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f"corrected/{stem}.reads-cor.full.fas"
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)
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# Pooled
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b_list = args.b.copy()

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