integration tests and fixes, production readiness report

Author: “Chris

.machine-dream.json

@@ -0,0 +1,58 @@
+{
+  "memorySystem": "agentdb",
+  "enableRL": true,
+  "enableReflexion": true,
+  "enableSkillLibrary": true,
+  "solving": {
+    "maxIterations": 50,
+    "maxSolveTime": 300000,
+    "reflectionInterval": 5,
+    "attentionWindowSize": 10,
+    "backtrackEnabled": false,
+    "guessThreshold": 0.3,
+    "strategies": [
+      "naked-single",
+      "hidden-single",
+      "pointing-pairs",
+      "box-line-reduction",
+      "naked-pairs",
+      "x-wing"
+    ]
+  },
+  "dreaming": {
+    "schedule": "after-session",
+    "compressionRatio": 10,
+    "abstractionLevels": 4,
+    "minSuccessRate": 0.7
+  },
+  "agentdb": {
+    "dbPath": ".agentdb",
+    "preset": "medium",
+    "quantization": "scalar",
+    "indexing": "hnsw"
+  },
+  "benchmarking": {
+    "enabled": true,
+    "outputDir": "./benchmarks",
+    "parallel": 1
+  },
+  "logging": {
+    "level": "info",
+    "outputDir": "./logs",
+    "format": "json"
+  },
+  "demo": {
+    "mode": false,
+    "speed": "realtime",
+    "pauseOnInsight": false
+  },
+  "hooks": {
+    "preTask": null,
+    "postTask": null,
+    "preEdit": null,
+    "postEdit": null,
+    "sessionEnd": null,
+    "sessionRestore": null
+  },
+  "key": "value"
+}

README.md

@@ -3,7 +3,7 @@
 **Continuous Machine Cognition & AgentDB Integration**
 
 > [!IMPORTANT]
-> **Current Status: Production Ready (95%)**
+> **Current Status: 72% Production Ready** (Assessment: Jan 7, 2026)
 >
 > ✅ **Phases 1-3 (Complete)**: TUI, CLI, GRASP loop, Dreaming pipeline, AgentDB persistence, LLM integration
 >
@@ -12,6 +12,8 @@
 > ✅ **Phase 5 (Complete)**: CLI Runtime - All commands tested and operational
 >
 > ✅ **Puzzle Generator**: Seed-based randomized generation (4×4 to 25×25 grids)
+>
+> ⚠️ **Production Readiness**: [View Assessment](docs/PRODUCTION_READINESS_SUMMARY.md) | [Action Plan](docs/PRODUCTION_ACTION_PLAN.md)
 
 ## 🎯 Project Status
 
@@ -313,6 +315,9 @@ machine-dream/
 | Document | Description |
 | :--- | :--- |
 | [**User Guide**](docs/USER_GUIDE.md) | **Start Here!** Instructions for installation, usage, and configuration. |
+| [**Production Readiness Assessment**](docs/PRODUCTION_READINESS_SUMMARY.md) | **NEW!** Current production status (72%), critical gaps, and timeline. |
+| [**Production Action Plan**](docs/PRODUCTION_ACTION_PLAN.md) | **NEW!** 11-week roadmap to production readiness with detailed tasks. |
+| [**Immediate Actions**](docs/IMMEDIATE_ACTION_CHECKLIST.md) | **NEW!** Week 1 checklist for fixing critical test failures. |
 | [**Continuous Machine Thinking Research**](docs/continuous-machine-thinking-research.md) | The foundational research report detailing the theory, findings, and performance metrics. |
 | [**POC Strategy Report**](docs/poc-strategy-report.md) | Detailed strategic analysis and implementation roadmap. |
 | [**Source Types**](src/types.ts) | TypeScript definitions that serve as the "Code-as-Spec" for the architecture, utilizing native `agentdb` types. |

docs/IMMEDIATE_ACTION_CHECKLIST.md

@@ -0,0 +1,310 @@
+# Immediate Action Checklist - Week 1
+
+**Project**: Machine Dream
+**Priority**: CRITICAL
+**Timeline**: 5 business days
+**Goal**: Fix test failures and establish baseline quality
+
+---
+
+## Day 1: Test Failure Analysis
+
+### Morning: Setup & Assessment
+- [ ] Pull latest code: `git pull origin llm_integration`
+- [ ] Clean install: `rm -rf node_modules && npm install`
+- [ ] Run full test suite: `npm test -- --run`
+- [ ] Document current test results:
+  ```bash
+  npm test -- --run > test-results-day1.txt 2>&1
+  ```
+- [ ] Review failing tests breakdown (52 failures)
+
+### Afternoon: ProfileStorage Debug
+- [ ] Read ProfileStorage implementation: `src/llm/profiles/ProfileStorage.ts`
+- [ ] Read ProfileStorage tests: `tests/unit/profiles/ProfileStorage.test.ts`
+- [ ] Identify root cause of 7 failures:
+  1. Save and Load - profile persistence
+  2. Profile Retrieval - count mismatch
+  3. Delete Profile - incomplete deletion
+  4. Export/Import - import logic
+  5. Export/Import - overwrite logic
+  6. Clear All - not clearing properly
+- [ ] Create debugging plan for Day 2
+
+**Deliverable**: Root cause analysis document
+
+---
+
+## Day 2: Fix ProfileStorage
+
+### Morning: Core Persistence Logic
+- [ ] Fix save/load implementation
+- [ ] Fix profile count tracking
+- [ ] Run save/load tests: `npm test -- ProfileStorage.test.ts`
+- [ ] Verify fixes work
+
+### Afternoon: CRUD Operations
+- [ ] Fix delete operation
+- [ ] Fix clearAll operation
+- [ ] Test delete operations
+- [ ] Test clear operations
+- [ ] Run all ProfileStorage tests: Should see 0/7 failures
+
+**Deliverable**: ProfileStorage tests passing
+
+---
+
+## Day 3: Export/Import & Remaining Tests
+
+### Morning: Export/Import Fixes
+- [ ] Fix export logic
+- [ ] Fix import logic
+- [ ] Fix import with overwrite
+- [ ] Test export/import scenarios
+- [ ] Verify all ProfileStorage tests pass (41 tests)
+
+### Afternoon: Other Test Failures
+- [ ] Run full test suite: `npm test -- --run`
+- [ ] Identify remaining failures (should be 45 left)
+- [ ] Categorize by module:
+  - [ ] CLI tests
+  - [ ] TUI tests
+  - [ ] Integration tests
+  - [ ] Unit tests
+- [ ] Fix top 5 most critical
+
+**Deliverable**: ProfileStorage 100% + progress on other tests
+
+---
+
+## Day 4: Test Stabilization
+
+### Full Day: Fix Remaining Failures
+- [ ] Fix CLI integration tests
+- [ ] Fix TUI integration tests
+- [ ] Fix unit test failures
+- [ ] Run test suite every hour to verify progress
+- [ ] Target: <10 failing tests by end of day
+
+**Deliverable**: >95% test pass rate
+
+---
+
+## Day 5: Quality Assurance & CI Setup
+
+### Morning: Final Test Fixes
+- [ ] Fix last remaining test failures
+- [ ] Verify 100% pass rate: `npm test -- --run`
+- [ ] Run typecheck: `npm run typecheck`
+- [ ] Run lint: `npm run lint` (fix critical errors)
+- [ ] Document test coverage: `npm test -- --coverage`
+
+### Afternoon: CI/CD Foundation
+- [ ] Create `.github/workflows/ci.yml`:
+  ```yaml
+  name: CI
+  on: [push, pull_request]
+  jobs:
+    test:
+      runs-on: ubuntu-latest
+      steps:
+        - uses: actions/checkout@v3
+        - uses: actions/setup-node@v3
+          with:
+            node-version: '20'
+        - run: npm ci
+        - run: npm run typecheck
+        - run: npm test
+        - run: npm run build
+  ```
+- [ ] Commit and push to trigger first CI run
+- [ ] Verify CI passes on GitHub
+- [ ] Enable branch protection (require CI to pass)
+
+**Deliverable**: All tests passing + CI operational
+
+---
+
+## Success Criteria
+
+By end of Week 1, you should have:
+- ✅ **Zero failing tests** (272/272 passing)
+- ✅ **CI/CD pipeline** running on GitHub Actions
+- ✅ **Clean builds** (typecheck, test, build all pass)
+- ✅ **Documentation** of test fixes and known issues
+
+---
+
+## Debugging Commands
+
+### Run Specific Test File
+```bash
+npm test -- ProfileStorage.test.ts
+```
+
+### Run Tests in Watch Mode
+```bash
+npm test  # Interactive mode
+```
+
+### Run Tests with Verbose Output
+```bash
+npm test -- --reporter=verbose
+```
+
+### Check Test Coverage
+```bash
+npm test -- --coverage
+```
+
+### Debug Single Test
+```bash
+npm test -- -t "should save and load profiles"
+```
+
+### Run TypeScript Checks
+```bash
+npm run typecheck
+```
+
+### Check for Type Errors in Specific File
+```bash
+npx tsc --noEmit src/llm/profiles/ProfileStorage.ts
+```
+
+---
+
+## Common Issues & Solutions
+
+### Issue: Tests fail locally but pass in CI
+**Solution**: Clean install
+```bash
+rm -rf node_modules package-lock.json
+npm install
+npm test
+```
+
+### Issue: File permission errors
+**Solution**: Check file paths and permissions
+```bash
+ls -la ~/.machine-dream/
+chmod 644 ~/.machine-dream/llm-profiles.json
+```
+
+### Issue: Database locked errors
+**Solution**: Close all instances and delete test DB
+```bash
+pkill -f machine-dream
+rm -f .agentdb test.db
+npm test
+```
+
+### Issue: Import/export tests fail
+**Solution**: Check file I/O and JSON serialization
+```bash
+# Test manually
+node -e "
+  const fs = require('fs');
+  const data = { test: 'value' };
+  fs.writeFileSync('test.json', JSON.stringify(data));
+  const loaded = JSON.parse(fs.readFileSync('test.json', 'utf-8'));
+  console.log(loaded);
+"
+```
+
+---
+
+## Daily Standup Template
+
+**Date**: _____
+**Progress**:
+- Completed: _____
+- Blocked by: _____
+- Tests passing: ___/272
+
+**Today's Focus**:
+- [ ] Task 1
+- [ ] Task 2
+- [ ] Task 3
+
+**Blockers**: None / [describe]
+
+---
+
+## Emergency Contacts
+
+If you get stuck:
+1. **Review Specifications**: `docs/specs/13-llm-profile-management.md`
+2. **Check Phase 4 Summary**: `docs/phase4-cli-wiring-summary.md`
+3. **Review Test Output**: Look for specific error messages
+4. **Debug Tests**: Add `console.log` to understand state
+5. **Isolate Issue**: Create minimal reproduction
+
+---
+
+## Week 1 Deliverables Checklist
+
+### Testing
+- [ ] All 272 tests passing
+- [ ] Test coverage report generated
+- [ ] No skipped or disabled tests
+- [ ] Test execution < 10 seconds
+
+### Code Quality
+- [ ] TypeScript typecheck passes
+- [ ] No TypeScript errors
+- [ ] ESLint passes (critical errors fixed)
+- [ ] No console.error in test output
+
+### CI/CD
+- [ ] GitHub Actions workflow created
+- [ ] First CI run successful
+- [ ] Branch protection enabled
+- [ ] Badge added to README
+
+### Documentation
+- [ ] Test fixes documented
+- [ ] Known issues logged
+- [ ] Next steps identified
+- [ ] Week 1 summary written
+
+---
+
+## Next Week Preview (Week 2)
+
+**Focus**: Remove mock implementations
+
+Tasks:
+1. Implement real memory command backend
+2. Implement real system command backend
+3. Add integration tests for new implementations
+4. Verify no mock data remains in production code
+
+---
+
+## Tracking Progress
+
+### Test Pass Rate
+| Day | Passing | Failing | Rate |
+|-----|---------|---------|------|
+| Mon | 220 | 52 | 81% |
+| Tue | ___ | ___ | ___% |
+| Wed | ___ | ___ | ___% |
+| Thu | ___ | ___ | ___% |
+| Fri | 272 | 0 | 100% ✅ |
+
+### Time Log
+| Day | Hours | Focus Area | Blockers |
+|-----|-------|------------|----------|
+| Mon | ___ | Test analysis | ___ |
+| Tue | ___ | ProfileStorage | ___ |
+| Wed | ___ | Export/Import | ___ |
+| Thu | ___ | Other tests | ___ |
+| Fri | ___ | CI setup | ___ |
+
+---
+
+**Checklist Version**: 1.0
+**Created**: January 7, 2026
+**Owner**: Development Team
+**Review**: End of each day