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Give ProLIF a logo #1041

Give ProLIF a logo

Give ProLIF a logo #1041

Workflow file for this run

name: tests
on:
push:
branches:
- "*"
pull_request:
branches:
- "*"
workflow_dispatch:
defaults:
run:
shell: bash -l {0}
concurrency:
group: "${{ github.ref }}-${{ github.head_ref }}"
cancel-in-progress: false
jobs:
build:
name: Build
# only run once if internal PR
if: github.event_name == 'push' || github.event.pull_request.head.repo.full_name != github.repository
uses: ./.github/workflows/_build-package.yml
with:
cache-package: true
upload-package: true
test-files: true
test-imports: true
unit-tests:
name: Test ${{ matrix.label }}
runs-on: ${{ matrix.os }}
# only run once if internal PR
if: github.event_name == 'push' || github.event.pull_request.head.repo.full_name != github.repository
strategy:
matrix:
include:
- label: earliest
os: ubuntu-latest
python-version: "3.10"
uv-sync-args: ""
uv-run-args: "--with rdkit==2022.09.1 --with mdanalysis==2.2.0"
coverage: false
- label: baseline
os: ubuntu-latest
python-version: "3.11"
uv-sync-args: "--locked"
uv-run-args: ""
coverage: true
- label: latest
os: ubuntu-latest
python-version: "3.13"
uv-sync-args: "--upgrade"
uv-run-args: ""
coverage: false
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Install uv
uses: astral-sh/setup-uv@v5
with:
python-version: ${{ matrix.python-version }}
enable-cache: true
cache-dependency-glob: "uv.lock"
- name: Install project and dependencies
run: |
uv sync --group tests ${{ matrix.uv-sync-args }}
- name: Show installed environment
run: |
uv pip list
- name: Run tests
run: |
uv run ${{ matrix.uv-run-args }} poe test \
--cov=prolif \
--cov-report=xml
- name: Measure tests coverage
if: matrix.coverage
uses: codecov/codecov-action@v4
with:
files: ./coverage.xml
fail_ci_if_error: true
verbose: true
token: ${{ secrets.CODECOV_TOKEN }}