Skip to content

Adds pybids compatability layer to bids2table #134

Adds pybids compatability layer to bids2table

Adds pybids compatability layer to bids2table #134

Workflow file for this run

name: CI
on:
push:
branches: ["main"]
pull_request:
branches: ["main"]
env:
UV_FROZEN: true
jobs:
format:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
submodules: "true"
- name: Install uv
uses: astral-sh/setup-uv@v5
with:
pyproject-file: pyproject.toml
- name: Install the project
run: uv sync --all-extras
- name: Check quality
run: |
uv run ruff check bids2table tests
uv run ruff format --check bids2table tests
tests:
runs-on: ubuntu-latest
needs: format
strategy:
matrix:
python-version: ["3.11", "3.12", "3.13"]
steps:
- uses: actions/checkout@v4
with:
submodules: "true"
- name: Install uv with python version
uses: astral-sh/setup-uv@v6
with:
python-version: ${{ matrix.python-version }}
- name: Run tests without cloudpathlib
run: |
uv run pytest tests
- name: Run tests with cloudpathlib
run: |
uv run --all-extras pytest \
--junitxml=pytest.xml \
--cov-report=xml:coverage.xml \
--cov=bids2table tests
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}