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Make pybids a conditional import on init #187

Make pybids a conditional import on init

Make pybids a conditional import on init #187

Workflow file for this run

name: CI
permissions:
contents: read
on:
push:
branches: ["main"]
pull_request:
branches: ["main"]
env:
UV_FROZEN: true
COVERAGE_PYTHON: "3.12"
jobs:
format:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v6
with:
submodules: "true"
- uses: astral-sh/setup-uv@v8.1.0
- run: uv sync --all-extras
- name: Check quality
run: |
uv run ruff check bids2table tests
uv run ruff format --check bids2table tests
tests:
runs-on: ubuntu-latest
needs: format
strategy:
matrix:
python-version: ["3.11", "3.12", "3.13", "3.14"]
steps:
- uses: actions/checkout@v6
with:
submodules: "true"
- uses: astral-sh/setup-uv@v8.1.0
with:
python-version: ${{ matrix.python-version }}
- run: uv sync --all-extras
- name: Run tests without cloudpathlib
run: |
uv run pytest \
-m "not cloud" \
--junitxml=pytest-cloudless.xml \
--cov-report=xml:coverage.xml \
--cov bids2table \
tests
- name: Run tests with cloudpathlib
run: |
uv run pytest \
-m "cloud" \
--junitxml=pytest-cloud.xml \
--cov-report=xml:coverage.xml \
--cov=bids2table \
--cov-append \
tests
- name: Merge JUnit XML reports
run: |
uvx junitparser merge \
pytest-cloudless.xml \
pytest-cloud.xml \
pytest.xml
- name: Record PR number
if: github.event_name == 'pull_request' && matrix.python-version == env.COVERAGE_PYTHON
run: echo "${{ github.event.number }}" > pr-number.txt
- uses: actions/upload-artifact@v7
if: github.event_name == 'pull_request' && matrix.python-version == env.COVERAGE_PYTHON
with:
name: coverage
retention-days: 1
path: |
coverage.xml
pytest.xml
pr-number.txt