update core utils

Author: jpillai00

src/rbc/core/utils.py

@@ -42,9 +42,7 @@ def get_base_entities(
         A string-mapping of BIDS entities to values.
     """
     file_entities = parse_bids_entities(in_file)
-    return {
-        k: v for k, v in file_entities.items() if k in ["sub", "ses", "task", "run"]
-    }
+    return {k: v for k, v in file_entities.items() if k in base_entities}
 
 
 def rename(in_file: str | Path, new_name: str | Path) -> Path:
@@ -55,7 +53,6 @@ def rename(in_file: str | Path, new_name: str | Path) -> Path:
         raise FileExistsError(f"Target file already exists: {new_path}")
     return in_file.rename(new_path)
 
-
 def save_directory(in_dir: str | Path, out_dir: str | Path, name: str) -> Path:
     """Save a directory by copying it to a new location.