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Implement Motion Correction #17

@nx10

Description

@nx10

Generate motion reference and run motion correction.

  • Create src/rbc/core/functional/motion.py
  • generate_motion_reference(): extract middle volume
  • motion_correction(): FSL mcflirt with reference
  • Unit test for middle volume logic
  • Integration test with 10 volumes (~1 min)
  • Full test marked as slow (~5 min)

Outputs: sbref, desc-motion_bold, desc-movementParameters_motion, motion matrices

Reference: Step 7: Motion Reference and Step 8: Motion Correction

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