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README.md

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@@ -187,7 +187,7 @@ For more details on available options, see the [orchestrator documentation](http
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doi: 10.1038/s41598-022-16003-x.
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3. John, D., Tang, Q., Albinali, F. and Intille, S., 2019. An Open-Source
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Monitor-Independent Movement Summary for Accelerometer Data Processing. Journal
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for the Measurement of Physical Behaviour, 2(4), pp.268-281.
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for the Measurement of Physical Behaviour, 2(4), pp.268-281.
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4. Zhou S, Hill RA, Morgan K, et al, Classification of accelerometer wear and
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non-wear events in seconds for monitoring free-living physical activityBMJ
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Open 2015; 5:e007447. doi: 10.1136/bmjopen-2014-007447.

docs/wristpy_tutorial.md

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- how to calibrate the data, computing ENMO and angle-z from the calibrated data and then plotting those metrics.
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- how to obtain non-wear windows and visualize them.
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- how to obtain sleep windows and visualize them.
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- how we can filter sleep windows that overlap with non-wear periods.
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- how we can filter sleep windows that overlap with non-wear periods.
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## Example 1: Running the default processor
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> ### Configuring a custom pipeline
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>
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> A custom processing pipeline can be easily created by modifying the input arguments to the `orchestrator.run` call.
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>> For example:
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>> ```python
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>> results = orchestrator.run(input = '/path/to/input/dir', output = '/path/to/output/dir', output_filetype = ".parquet", calibrator="gradient", activity_metric="ag_count", nonwear_algorithm=["detach"], epoch_length=10, thresholds=[0.05, 0.1, 0.3])

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