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sessionInfo.txt
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64 lines (59 loc) · 4.95 KB
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R version 4.0.2 (2020-06-22)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.7
Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] grid stats4 parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] vegan_2.5-7 permute_0.9-5 biomaRt_2.44.4
[4] mixOmics_6.23.4 lattice_0.20-45 MASS_7.3-54
[7] cowplot_1.1.1 ggplotify_0.1.0 magick_2.7.3
[10] circlize_0.4.13 ComplexHeatmap_2.4.3 ggraph_2.0.5
[13] tidygraph_1.2.0 ggthemes_4.2.4 corrplot_0.92
[16] ggrepel_0.9.1 ggridges_0.5.3 ggbeeswarm_0.7.0
[19] eulerr_6.1.1 qvalue_2.20.0 DESeq2_1.28.1
[22] RUVSeq_1.22.0 edgeR_3.30.3 limma_3.44.3
[25] EDASeq_2.22.0 ShortRead_1.46.0 GenomicAlignments_1.24.0
[28] SummarizedExperiment_1.18.2 DelayedArray_0.14.1 matrixStats_0.61.0
[31] Rsamtools_2.4.0 GenomicRanges_1.40.0 GenomeInfoDb_1.24.2
[34] Biostrings_2.56.0 XVector_0.28.0 IRanges_2.22.2
[37] S4Vectors_0.26.1 BiocParallel_1.22.0 Biobase_2.48.0
[40] BiocGenerics_0.34.0 writexl_1.4.0 data.table_1.14.2
[43] forcats_0.5.1 stringr_1.4.0 dplyr_1.0.7
[46] purrr_0.3.4 readr_2.1.0 tidyr_1.1.4
[49] tibble_3.1.6 ggplot2_3.3.5 tidyverse_1.3.1
loaded via a namespace (and not attached):
[1] utf8_1.2.2 R.utils_2.11.0 tidyselect_1.1.1 RSQLite_2.2.8
[5] AnnotationDbi_1.50.3 DESeq_1.39.0 munsell_0.5.0 withr_2.4.2
[9] colorspace_2.0-2 knitr_1.36 rstudioapi_0.13 labeling_0.4.2
[13] GenomeInfoDbData_1.2.3 hwriter_1.3.2 polyclip_1.10-0 bit64_4.0.5
[17] farver_2.1.0 vctrs_0.3.8 generics_0.1.1 xfun_0.28
[21] BiocFileCache_1.12.1 R6_2.5.1 clue_0.3-60 graphlayouts_0.7.1
[25] locfit_1.5-9.4 bitops_1.0-7 cachem_1.0.6 gridGraphics_0.5-1
[29] assertthat_0.2.1 scales_1.1.1 vroom_1.5.6 beeswarm_0.4.0
[33] gtable_0.3.0 rlang_0.4.12 genefilter_1.70.0 GlobalOptions_0.1.2
[37] splines_4.0.2 rtracklayer_1.48.0 broom_0.7.10 reshape2_1.4.4
[41] modelr_0.1.8 GenomicFeatures_1.40.1 backports_1.3.0 rsconnect_0.8.24
[45] tools_4.0.2 ellipsis_0.3.2 RColorBrewer_1.1-2 Rcpp_1.0.7
[49] plyr_1.8.6 progress_1.2.2 zlibbioc_1.34.0 RCurl_1.98-1.5
[53] prettyunits_1.1.1 openssl_1.4.5 GetoptLong_1.0.5 viridis_0.6.2
[57] haven_2.4.3 cluster_2.1.2 fs_1.5.0 magrittr_2.0.1
[61] RSpectra_0.16-0 reprex_2.0.1 aroma.light_3.18.0 hms_1.1.1
[65] evaluate_0.14 xtable_1.8-4 XML_3.99-0.8 jpeg_0.1-9
[69] readxl_1.3.1 gridExtra_2.3 shape_1.4.6 compiler_4.0.2
[73] ellipse_0.4.2 crayon_1.4.2 R.oo_1.24.0 htmltools_0.5.2
[77] mgcv_1.8-38 corpcor_1.6.10 tzdb_0.2.0 geneplotter_1.66.0
[81] lubridate_1.8.0 DBI_1.1.1 tweenr_1.0.2 dbplyr_2.1.1
[85] rappdirs_0.3.3 Matrix_1.3-4 cli_3.1.0 R.methodsS3_1.8.1
[89] igraph_1.2.8 pkgconfig_2.0.3 xml2_1.3.2 rARPACK_0.11-0
[93] annotate_1.66.0 vipor_0.4.5 rvest_1.0.2 yulab.utils_0.0.4
[97] digest_0.6.28 polylabelr_0.2.0 rmarkdown_2.11 cellranger_1.1.0
[101] curl_4.3.2 rjson_0.2.20 nlme_3.1-153 lifecycle_1.0.1
[105] jsonlite_1.7.2 viridisLite_0.4.0 askpass_1.1 fansi_0.5.0
[109] pillar_1.6.4 fastmap_1.1.0 httr_1.4.2 survival_3.2-13
[113] glue_1.5.0 png_0.1-7 bit_4.0.4 ggforce_0.3.3
[117] stringi_1.7.5 blob_1.2.2 latticeExtra_0.6-29 memoise_2.0.0