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Package: mlumr
Title: Multilevel Unanchored Meta-Regression for Indirect Treatment Comparisons
Version: 0.1.0
Authors@R: c(
person("Ahmad", "Sofi-Mahmudi", , "a.sofimahmudi@gmail.com", role = c("aut", "cre"),
comment = c(ORCID = "0000-0001-6829-0823")),
person("Conor", "Chandler", role = "aut",
comment = c(ORCID = "0000-0002-1365-9002")))
Description: Bayesian multilevel unanchored meta-regression (ML-UMR) for
indirect treatment comparisons using individual patient data (IPD) and
aggregate data (AgD). Implements shared prognostic factor assumption
(SPFA) and relaxed SPFA models for binary, continuous, and count
outcomes via 'Stan'. Also
provides simulated treatment comparison (STC) via parametric
G-computation and naive unadjusted benchmarks. ML-UMR is an
adaptation of the ML-NMR methodology (Phillippo et al. 2020,
<doi:10.1111/rssa.12579>) implemented in the 'multinma' package
(GPL-3) to the unanchored two-trial case; the public API
deliberately mirrors multinma's so users can move between ML-NMR
and ML-UMR with the same workflow.
License: GPL-3
URL: https://github.com/choxos/mlumr, https://choxos.github.io/mlumr/
BugReports: https://github.com/choxos/mlumr/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Biarch: true
Depends:
R (>= 4.1.0)
Imports:
methods,
stats,
Rcpp (>= 0.12.0),
RcppParallel (>= 5.0.1),
rstan (>= 2.26.0),
rstantools (>= 2.3.0),
randtoolbox,
copula
LinkingTo:
BH (>= 1.66.0),
Rcpp (>= 0.12.0),
RcppEigen (>= 0.3.3.3.0),
RcppParallel (>= 5.0.1),
rstan (>= 2.26.0),
StanHeaders (>= 2.26.0)
Suggests:
testthat (>= 3.0.0),
knitr,
rmarkdown,
posterior,
bayesplot,
loo,
Matrix,
cmdstanr,
withr
Additional_repositories: https://stan-dev.r-universe.dev
SystemRequirements: GNU make
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0