simplified output

Author: kbpi314

mmeds/snakemake/rules/picrust2.smk

@@ -4,9 +4,9 @@ rule picrust2_core:
         rep_seqs = "tables/rep_seqs_table.fasta",
         biom_feature_table = "tables/asv_table.biom"
     output:
-        picrust2_results = "picrust2_out"
+        "picrust2_out"
     conda:
         # "qiime2-2020.8.0" # or should I use "qiime2-2023.9"
         /sc/arion/projects/MMEDS/.modules/picrust2
     shell:
-        picrust2_pipeline.py -s {input.rep_seqs} -s {input.biom_feature_table} {output.picrust2_results}
+        picrust2_pipeline.py -s {input.rep_seqs} -s {input.biom_feature_table} {output}