docs: confirmed support for bwa-mem2 and minimap2 #72
Workflow file for this run
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| name: Unit Tests | |
| on: [ push, pull_request ] | |
| jobs: | |
| unit-tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| suite: [ neodisambiguate ] | |
| java-version: [ 8, 11, 17, 21 ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-java@v4 | |
| with: | |
| distribution: 'temurin' | |
| java-version: ${{ matrix.java-version }} | |
| - name: Cache for Scala Dependencies | |
| uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/.mill/download | |
| ~/.m2/repository | |
| ~/.cache/coursier | |
| key: ${{ runner.os }}-java-mill-${{ matrix.java-version }}-${{ hashFiles('**/build.sc') }} | |
| restore-keys: ${{ runner.os }}-java-mill- | |
| - name: Compile Scala Code | |
| run: | | |
| ./mill --no-server clean | |
| ./mill --no-server --disable-ticker ${{ matrix.suite }}.compile | |
| - name: Test Scala Code | |
| run: | | |
| ./mill --no-server --disable-ticker ${{ matrix.suite }}.test | |
| - name: Create Code Coverage Report | |
| if: matrix.java-version == '11' | |
| run: | | |
| ./mill --no-server --disable-ticker ${{ matrix.suite }}.scoverage.htmlReport | |
| - name: Upload Code Coverage Report | |
| uses: actions/upload-artifact@v4 | |
| if: matrix.java-version == '11' | |
| with: | |
| name: code-coverage | |
| path: out/neodisambiguate/scoverage/htmlReport.dest/ |